KEGG   Helicobacter apodemus: CDV25_05195
Entry
CDV25_05195       CDS       T05516                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
had  Helicobacter apodemus
Pathway
had00740  Riboflavin metabolism
had01100  Metabolic pathways
had01110  Biosynthesis of secondary metabolites
had01240  Biosynthesis of cofactors
had02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:had00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CDV25_05195 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CDV25_05195 (ribD)
Enzymes [BR:had01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CDV25_05195 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CDV25_05195 (ribD)
SSDB
Motif
Pfam: dCMP_cyt_deam_1 RibD_C MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AWI34225
UniProt: A0A2U8FFL9
Position
complement(1058136..1059173)
AA seq 345 aa
MVDSFYLDLAIKKAWDYQCQTLPNPAVGAVILDKFGAILSIQAHKVAGDPHAEVLALQES
YYRLSGDSSIFNLFQSQEIHQFLLENAKDYFKDITLYVTLEPCIHRGKTPSCAELLKLLG
IKKIIIGTQDCNKEAKGGANALKSCGVQVIKAWEEKELLRAYEDSKALLIPFSSLQSKGS
FILFKYASRLDGSIDGGQISSKAAQSFMHNLRTRVDILLISGKSVRLDNPILDCRYATLK
DKRPPCVTILTHLRDFPKKAPLFFVPKREVKILHKIEKFEGFVMCEGGAELFKTLIPQID
MVLFFLNPSMQSDFQLHMQLQANFRILYSQQIGDDLILWLQPFRD
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggtagattctttttatcttgatttagcgattaaaaaagcttgggattatcagtgtcaa
actttgccaaatcctgctgttggggctgttatcttagataagtttggggcgattttaagc
attcaagctcacaaagttgcaggtgatccgcacgctgaggttttagcattgcaagaatct
tattatcgcctaagcggagattcttcaatttttaatctttttcaatctcaagagattcat
caatttcttttagaaaatgctaaggattatttcaaagatataaccctttatgttacttta
gaaccctgcatacatcgtggaaaaactccctcttgtgcagaacttttaaaattattaggg
attaaaaaaatcattattgggacacaggattgtaataaagaggctaaaggaggggctaac
gcacttaaaagttgtggagtgcaagttataaaggcttgggaggaaaaagagcttttgagg
gcttatgaagattctaaggcattattaattccttttagtagtctgcaaagcaaagggagt
ttcatcctttttaaatatgctagtcgtttagatggcagcattgatggagggcaaattagc
tctaaagccgcacaaagttttatgcataatttaaggacaagagtagatatccttctaatt
tctggtaaaagtgtgcgtttagataatcccatacttgattgcaggtatgcaaccttaaag
gataaaagaccaccttgtgtaacaatcttaacgcatttaagagattttcctaaaaaagct
cctttattttttgttcctaagagagaagtaaaaatactccataagatagaaaagtttgaa
ggttttgtgatgtgtgaggggggagcagagttgtttaagactttgatcccccaaattgat
atggtattgttttttctaaatccttctatgcagagtgattttcagcttcatatgcaactt
caagctaattttaggattttgtattcacaacaaattggggatgatttaatattatggctt
cagccttttagggattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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