KEGG   Halohasta litchfieldiae: halTADL_1058
Entry
halTADL_1058      CDS       T05239                                 
Name
(GenBank) DNA mismatch repair MutS family protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
hae  Halohasta litchfieldiae
Pathway
hae03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    halTADL_1058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hae03400]
    halTADL_1058
DNA repair and recombination proteins [BR:hae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     halTADL_1058
SSDB
Motif
Pfam: MutS_V AAA_21 MutS_III AAA_28 AAA_14 HHH_5 DUF1967 HYPK_UBA AAA_29 FeoA AAA_22 AAA_23
Other DBs
NCBI-ProteinID: ATW87852
Position
1023370..1025130
AA seq 586 aa
MRLEAYWGVGPKTADLLRESIGETAAITAIEAADIRTLAEAGVPRGRAVRILRRANGTAG
IDVLGTSDTRSVYDELLTLASSYAVADHAADRIRVMTPLTDREAITSRLDDVLAAKGVWQ
DLSEVDRQRVLAAFANYDEAGGTDRAAVETALELRAVGLEGSTFEALERIDEAALTEAAG
ALGYIRETDDGPTVIEGADEELDRLRSQLDAAQKRNNAAFDIIDKVRDGGVRDMQAFQSG
VVDHVASETEIPHNTIRSAAPDEAVDAADFVSATLRNLVADLESEVDANEETVAADLRER
IDTAEADVEAAVDAVSEIALSLSLGRFAAEYDLQRPTLVDDGLAVVGARNLFLDGEVQPI
TYGVGNHALTDTPRAVAPPTGDRVTVLTGANSGGKTTLLETLSQVALLTAMGLPVPAEQA
AVGQFETIVFHRRHASFNAGVLESTLKSIVPPLTTEGKALMLVDEFEAITEPGRAADLLN
GLVSLSVDQSALGVYVTHLADDLSPLPETARIDGIFAEGLTPDLELRVDYQPRFGTVGKS
TPEFIVSRLVANANDRAERAGFESLAAAVGEEAVQRTLSDAQWDEK
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgcgactggaagcctactggggtgtgggaccgaaaaccgccgacctgctgcgggagtcg
attggcgaaactgcggccatcaccgctatcgaggccgccgacatccgcacgctggccgag
gctggcgtcccacgcggccgagcggtcagaatcctgcgccgagccaacggcaccgcaggc
atcgacgtcctcggcacgagcgatactcggagcgtctacgacgaactgctgacactcgcc
agcagctacgcggtcgccgaccacgccgccgaccgaatccgcgtcatgacaccgctgacc
gaccgcgaggcaatcaccagtcgactcgatgacgtgctggcagccaagggcgtctggcag
gaccttagcgaagtcgaccgccagcgcgtgctcgctgccttcgcgaactacgacgaggcc
ggtggcaccgaccgcgcggccgttgagactgcgctcgaactccgggcggtcggactggaa
gggtcgacgttcgaggccctcgaacggatcgacgaagcagcactcaccgaggccgcgggc
gcgctgggctacattcgagagactgacgacgggccgaccgtcattgagggcgcagacgag
gaactcgaccgcctccggagtcaactcgatgcggcacagaaacgcaacaacgcggccttc
gacatcatcgacaaagtccgtgatggcggcgttcgggatatgcaagccttccagagcggc
gtcgtcgaccacgtcgccagcgagaccgagattccccacaatacgatccggtcggccgcc
cctgacgaggccgtcgacgccgccgacttcgtgagtgcgacactccgaaatctcgttgcc
gacctcgaaagcgaggtcgacgccaacgaggaaactgtcgccgccgacctccgcgagcgg
atcgacaccgccgaagccgacgttgaggctgcggtcgacgcggttagcgagatcgcgctg
tcgctctcgctgggcagatttgccgccgagtacgatctccagcgcccgacgctggtcgac
gacggactggcggtggtcggcgcacggaacctctttctcgacggtgaggtccagccgatc
acctacggagtcgggaaccacgcgcttacagataccccgcgggcagttgcgccgccgact
ggcgaccgcgtgaccgttctcacgggcgcgaactccggcggaaagacgacgctgctcgaa
acactgagtcaggtcgccctgctcacggcgatgggcctcccagtccccgccgagcaggcc
gcagtcggccagttcgagaccattgtcttccatcgacgccacgcttcgtttaatgcaggc
gtcctcgaatcgacgctcaaatccatcgtgccgccgctgacaactgaggggaaggcacta
atgttggtcgacgagttcgaggcgatcaccgaaccgggacgcgccgccgatctgctgaat
ggtctggtctcgctttcggtcgaccagtcggccctcggggtgtatgtcacccatctcgcc
gatgacctgagtccactgcccgagacggcccgtatcgatggaattttcgccgaagggctg
acccccgatttggaactcagagtcgactatcagccacggttcgggaccgtcgggaagtcg
acgccggagttcatcgtttcgcggctggtcgccaacgccaacgaccgcgccgagcgagca
gggttcgaatcgctggccgccgcagtgggtgaggaagcagtgcaacggacgctgtcggat
gcgcagtgggatgaaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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