KEGG   Haloplanus aerogenes: DU502_15900
Entry
DU502_15900       CDS       T05732                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
haer  Haloplanus aerogenes
Pathway
haer03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:haer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DU502_15900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:haer03000]
    DU502_15900
   03021 Transcription machinery [BR:haer03021]
    DU502_15900
Transcription factors [BR:haer03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    DU502_15900
Transcription machinery [BR:haer03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     DU502_15900
  RNA polymerase III system
    TFIIIB
     DU502_15900
  RNA polymerase I system
    SL1/TIF-1B
     DU502_15900
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-ProteinID: AZH26765
UniProt: A0A3M0CHU4
Position
3109098..3109658
AA seq 186 aa
MSDPADSIEIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFR
SGKIVCTGAKSIDDVHDALGIIFQKLRDLQIPVEESPEITVQNIVSSADLGHTLNLNALA
IGLGLEDVEYEPEQFPGLVYRMDDPDVVILLFGSGKIVITGGKRTADAAEAVDVIVDRID
DLGLLG
NT seq 561 nt   +upstreamnt  +downstreamnt
atgagtgacccggcagattcgatagagattcagaacgtggtggcgtcgaccggcatcggg
caagagctcgatctcgaagcgctcgcggaggacctccccggggccgacttcaatcccgac
aacttcccagggctggtctaccgcacgcaggaaccgaaagcggcggccctcatcttccgg
tcggggaagatcgtgtgcacgggcgcgaagagtatcgacgacgtccacgacgcactcggt
atcatcttccagaaactccgcgacctgcagattcccgtcgaggagagcccagagatcacg
gtccagaacatcgtctccagcgcggatctgggccacacgctcaacctcaacgccctcgcc
atcgggcttgggctggaggacgtggagtacgaaccggaacagttccccggtctcgtctac
cgcatggacgatcccgacgtggtcatcctgctgttcggcagcgggaaaatcgtcatcacg
ggtgggaagcggacggccgacgccgccgaggcggtcgacgtgatcgtcgaccgcatcgac
gatctgggactgctgggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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