KEGG   Halomonas sp. SF2003: C8233_10900
Entry
C8233_10900       CDS       T05423                                 
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
haf  Halomonas sp. SF2003
Pathway
haf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    C8233_10900 (xseB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:haf03400]
    C8233_10900 (xseB)
Enzymes [BR:haf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     C8233_10900 (xseB)
DNA repair and recombination proteins [BR:haf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     C8233_10900 (xseB)
SSDB
Motif
Pfam: Exonuc_VII_S
Other DBs
NCBI-ProteinID: AVV34084
Position
complement(2634881..2635165)
AA seq 94 aa
MAEKEVPQDFAATLARLEGLVTRLEAGDMSLEASLGAFEEGVSLAREAQQRLDSAELRLQ
ALVEGPEGALTPTAFTAPDAAGSMAGEADEEKDW
NT seq 285 nt   +upstreamnt  +downstreamnt
atggccgaaaaggaagtgccacaggatttcgccgccaccctggcccgtcttgaagggttg
gtgacgcggctcgaagctggcgacatgtcgctggaagcgtcactgggcgcttttgaagag
ggcgtgagcctggcgcgcgaggcgcagcagcggctcgacagcgccgagttgcgcctgcag
gcattggtggaaggcccggaaggtgcgctgacgcccacggcgtttacggcgcccgatgcc
gcaggcagcatggcgggtgaagcggacgaggagaaggactggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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