KEGG T05423: C8233

Halomonas sp. SF2003: C8233_11100

Entry

C8233_11100       CDS       T05423

Name

(GenBank) glycine--tRNA ligase subunit beta

K01879

glycyl-tRNA synthetase beta chain [EC:6.1.1.14]

Organism

haf Halomonas sp. SF2003

Pathway

haf00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:haf00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    C8233_11100
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:haf01007]
    C8233_11100
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:haf03016]
    C8233_11100
Enzymes [BR:haf01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     C8233_11100
Amino acid related enzymes [BR:haf01007]
Aminoacyl-tRNA synthetase
  Class II (C/G)
   C8233_11100
Transfer RNA biogenesis [BR:haf03016]
Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    C8233_11100

SSDB

Motif

Pfam:

tRNA_synt_2f DALR_1

Other DBs

NCBI-ProteinID:

AVV34119

Position

2678348..2680417

AA seq 689 aa
MASVNTLLIELGCEELPPGAIDALADSLANGLADGLRDAEVAFGQVRAYATPRRLAVMIE
SLAERQPDREIEKRGPAKAAAFKDGEPTRAVQGFARSCGVEVSDLIELETDKGTWLGYRH
TQPGEHLSALLPAMLEQVVARLPVPKNMRWGASRIEFSRPVHWLVALYGSEVIEASVLGL
DSGRTTFGHRFHAPQAITLAHAEDYLDALEDARVLANREVRRERIREQVQAEAEVYGANA
VIEEALLNEVNGLVEWPVALTGTFDERFLEVPAECLISSMKANQKYFHLLDNDGKLKPAF
ITISNIESKDPQQVISGNEKVIRPRLGDAAFFYETDLRSTLESRREKLESVVFQQKLGSM
AEKARRSEAVARHIAERIGADVDHAARAAQLAKTDLVTEMVLEFPELQGIMGHYYARHDG
EDATVALALEEQYLPRFAGDAIPTTKAGMAIALADRLDTLTGIFGIGQRPTGAKDPFALR
RATIGVLNILIKGELDLDLRELLTVSAEQHRDLPKAEGLVEDVLEYMLDRFRAWASDEGM
GAELYLAVRTLKISNPLDFARRLRAVHAFGERPEAAALAAANKRVSNILAKAEHDGRTEV
DASLLSEPAEQALADALTARGAEVAPLFAAARYQEALDALASLREPVDAFFDQVMVNADD
AAVRANRLAMLASLQGLFMGVADISLLTQ

NT seq 2070 nt +upstreamnt +downstreamnt
atggcctccgtgaataccctgctgatcgaactgggctgcgaagaactgccgccgggcgcc
atcgacgcactcgctgacagcctcgccaacggcctcgccgatggcctgcgcgacgccgaa
gtcgccttcggtcaggtacgtgcctacgccacaccgcgtcgtctggcggtgatgatcgaa
tccctggccgagcgccagccggaccgcgagatcgagaagcgcggaccggccaaggccgcc
gccttcaaggatggcgaaccgacccgtgcggtgcagggcttcgcccgctcctgcggtgtc
gaagtcagtgacctgatcgagctggaaaccgacaagggcacctggctcggctatcgtcac
acccagccgggcgagcatctctccgccctgctgccggccatgctggagcaggtcgtggct
cgcctgccggtgccgaagaacatgcgctggggtgcctcacgcatcgagttctcgcgtccg
gtacattggctggtcgcgctctacggcagcgaagtgatcgaggccagcgtgctcggcctt
gactccggtcgcaccaccttcggccaccgcttccatgcgccgcaggccatcacgctggcg
cacgccgaggactacctcgacgcgctggaagatgcccgcgtgctggccaaccgtgaggtg
cgccgtgagcgtatccgcgaacaggtccaggccgaggcggaagtctatggtgccaacgcc
gtcatcgaagaggccctgctcaacgaggtcaacggcctcgtggaatggccggtggcgctg
acgggcaccttcgacgagcgcttcctggaagtgccggcggagtgtctgatctcctccatg
aaggccaaccagaagtacttccacctgctggacaacgacggcaagctcaagccggccttc
atcaccatctccaatatcgagagcaaggacccgcaacaggtcatctccggtaacgagaag
gtgattcgtccgcgtctgggcgatgccgccttcttctacgagaccgacctgcgcagcacg
ctggaatcgcgtcgcgagaagctcgagagcgtcgtcttccagcagaagctgggcagcatg
gccgagaaggcccgtcgcagcgaagccgtggcacgccacatcgcggaacgcatcggtgcc
gatgtcgaccacgccgcacgtgccgcacagctggccaagaccgacctggtcaccgagatg
gtgctggagttcccggaactgcagggcatcatgggccactactacgcccgtcacgatggc
gaagatgccaccgtcgctctcgcactggaagaacagtatctgccgcgcttcgccggcgat
gcgatccccacgaccaaggccggcatggcgattgccctggccgaccgtctcgacaccctg
accggcatcttcggcatcggtcagcgtccgaccggcgccaaggacccgttcgcactgcgt
cgcgccaccatcggggtgctcaacatcctgatcaagggcgagctggacctcgacctgcgc
gagctgctgaccgtcagcgccgagcagcatcgtgatctgcccaaggccgaaggactggtc
gaggacgtgctcgagtacatgctcgatcgcttccgcgcctgggccagcgatgaaggcatg
ggtgccgagctgtacctggccgtgcgtaccctgaagatcagtaatccgctggacttcgcg
cgtcgtctgcgtgccgtgcacgccttcggcgaacgcccggaagccgctgctctggctgca
gccaacaagcgtgtctccaacatcctcgccaaggccgagcacgatggtcgcaccgaggtg
gatgcgagcctgttgagcgagccggccgagcaggcactggcagacgccctgacggcacgt
ggcgcggaagtggcaccgctgttcgccgcggcacgttaccaggaggccctcgatgcactg
gccagcctgcgcgagccggtcgatgccttcttcgatcaggtgatggtcaacgccgacgat
gccgccgtgcgcgccaatcgtctggcgatgctggccagtctgcaaggcctgttcatgggt
gtggccgacatcagtctgctgacccaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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