KEGG   Halomonas sp. GFAJ-1: BB497_11785
Entry
BB497_11785       CDS       T05375                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
hag  Halomonas sp. GFAJ-1
Pathway
hag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BB497_11785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hag03019]
    BB497_11785
   03110 Chaperones and folding catalysts [BR:hag03110]
    BB497_11785
   03029 Mitochondrial biogenesis [BR:hag03029]
    BB497_11785
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hag04147]
    BB497_11785
Enzymes [BR:hag01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     BB497_11785
Messenger RNA biogenesis [BR:hag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BB497_11785
Chaperones and folding catalysts [BR:hag03110]
 Heat shock proteins
  HSP60 / Chaperonin
   BB497_11785
Mitochondrial biogenesis [BR:hag03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    BB497_11785
Exosome [BR:hag04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BB497_11785
  Exosomal proteins of other body fluids (saliva and urine)
   BB497_11785
  Exosomal proteins of breast cancer cells
   BB497_11785
  Exosomal proteins of colorectal cancer cells
   BB497_11785
  Exosomal proteins of bladder cancer cells
   BB497_11785
SSDB
Motif
Pfam: Cpn60_TCP1 MukE
Other DBs
NCBI-ProteinID: AVI63328
UniProt: H0IXL8
Position
complement(2632364..2634007)
AA seq 547 aa
MSAKQVKFSDDARKRMARGVDVLANAVKVTLGPKGRNVVLEKSFGSPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASQTSDAAGDGTTTATVLAQAIIAEGLKGVTAGMNPMDLKRGI
DQAVAAAVKEIKAMSVPCTDTKSIAQVGTISANGDKRIGEIIAEAMEKVGKEGVITVDEG
RGFEDELEVVEGMQFDRGYLSPYFVTNQDTMTVELEDPYILIVDKKISNIRELLPVLEAV
AKQGKPLAIIAEDIEGEALATLVVNNMRGIVKVAAAKAPGFGDRRKSMLQDIAILTNGTV
ISEEVGLTLEQANLDHLGTAKRMTMSKENTTIIDGAGAEGDIEARVNQIRAQIEETSSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGTALV
RVMAKVQGLTGENEDQNHGINMALRAMQSPLRQIVSNAGEEPAVVINRVKDETGNFGYNA
QTGEFGDLFEMGVLDPAKVTRTALQSAGSVAGLMITTECMIAEDPEEKDAAPDMGGMGGM
GGMGGMM
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgtcagctaaacaagttaagttctcagatgatgcccgcaaacgcatggcgcgtggtgtt
gacgtactggcaaatgcagtaaaagtcaccctgggcccaaaaggccgtaacgtagtactg
gaaaagtcgtttggctctccgaccgttactaaagacggtgtttctgttgccaaagagatc
gagctgaaagacaagttcgaaaacatgggcgcacagatggtaaaagaagttgcttcacag
acttctgacgctgcgggtgacggcaccaccaccgctaccgttctggctcaggccattatt
gcggaaggcctgaaaggcgtaaccgcgggcatgaacccgatggatcttaagcgcggtatt
gatcaagccgttgccgctgccgttaaagaaatcaaggcgatgtctgtaccttgcaccgac
accaagtcgattgcccaggtaggcactatctctgctaacggtgacaagcgcatcggtgaa
atcatcgctgaagcgatggaaaaagtcggtaaagaaggcgtcatcactgttgatgaaggc
cgtggctttgaagacgagctggaagtcgttgaaggcatgcagtttgatcgcggctacctc
tcgccctacttcgttaccaaccaggataccatgacggttgaactggaagatccttacatc
ctgatagtggataaaaagatctccaacatccgcgagctactgcctgtactagaagcggtt
gctaaacaaggcaagccgctggctatcatcgctgaagatattgaaggcgaagccctggca
acgctggttgtgaacaacatgcgcggtatcgttaaagtggccgctgctaaagcaccgggc
tttggcgaccgtcgcaaatccatgctgcaggatatcgccatcctgactaacggcacggtt
atctccgaagaagtaggcctgacgcttgagcaagcgaacctggatcatctgggtaccgct
aagcgtatgactatgtctaaagagaacaccaccatcattgatggcgctggtgcagaaggc
gatatcgaagcacgcgttaaccagatccgcgcgcaaatcgaagaaacctcttctgactac
gacaaagagaagctgcaagagcgcgttgccaaactggcaggcggtgttgctgttatccgc
gtcggagctgccaccgaagtagaaatgaaagagaagaaagcccgcgtcgaagacgcgctg
cactctacgcgtgcagccgttgaagaaggtgttgtacctggcggcggtactgcactggtt
cgcgttatggccaaagtacaaggcctgactggcgaaaacgaagaccagaaccacggtatc
aacatggccctacgcgctatgcagtcaccgctgcgtcaaatcgtttctaacgctggtgaa
gaacccgcagtggttatcaaccgtgtgaaagacgaaaccggcaactttggttacaacgca
caaactggcgagtttggcgacctgttcgaaatgggcgttctagatccggcaaaagttacc
cgtactgcgctgcagtccgctggttctgttgcaggtcttatgatcaccaccgagtgcatg
atcgctgaagacccggaagagaaagatgccgcgcctgatatgggtggcatgggcggaatg
ggtggtatgggcggcatgatgtga

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