KEGG   Halomonas sp. GFAJ-1: BB497_11850
Entry
BB497_11850       CDS       T05375                                 
Name
(GenBank) Fis family transcriptional regulator
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
hag  Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:hag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hag03000]
    BB497_11850
   03036 Chromosome and associated proteins [BR:hag03036]
    BB497_11850
   03400 DNA repair and recombination proteins [BR:hag03400]
    BB497_11850
Transcription factors [BR:hag03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    BB497_11850
Chromosome and associated proteins [BR:hag03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BB497_11850
DNA repair and recombination proteins [BR:hag03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      BB497_11850
SSDB
Motif
Pfam: HTH_8 HTH_30 Xre-like-HTH Phage_NinH
Other DBs
NCBI-ProteinID: AVI63340
UniProt: H0IXN0
Position
complement(2644853..2645176)
AA seq 107 aa
MTERDLLSSEFSPQLSGTLADPATTTPPQPLREAVETAMRRYFEHLDGSQATDLYAMVMA
EVEAPLLACVMEHTDGNQTRAADVLGLNRGTLRKKLKQYGLIEGDAP
NT seq 324 nt   +upstreamnt  +downstreamnt
atgaccgaacgcgacctgctttccagcgaattttctccacagctctccggcacgctggcg
gaccctgctaccacaacgccgcctcaaccgctaagagaggcggttgaaaccgctatgcgt
cgttacttcgagcatctcgatggcagtcaggcaactgacctgtatgccatggtgatggcc
gaagtagaggcgccacttcttgcctgtgttatggaacataccgatggcaaccagacccgc
gctgccgatgtactgggcttaaatcgcggcacgctgcgcaagaagctgaaacagtacgga
ctcattgaaggtgacgccccctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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