KEGG   Halomonas sp. GFAJ-1: BB497_12380
Entry
BB497_12380       CDS       T05375                                 
Name
(GenBank) Holliday junction DNA helicase RuvA
  KO
K03550  holliday junction DNA helicase RuvA
Organism
hag  Halomonas sp. GFAJ-1
Pathway
hag03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BB497_12380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hag03400]
    BB497_12380
DNA repair and recombination proteins [BR:hag03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BB497_12380
    RecFOR pathway proteins
     BB497_12380
SSDB
Motif
Pfam: RuvA_N HHH_5 RuvA_C HHH RecR_HhH IMS_HHH Transposase_20 HHH_8 HHH_3 Cdd1
Other DBs
NCBI-ProteinID: AVI63436
UniProt: H0IXY2
Position
2754565..2755173
AA seq 202 aa
MIGRLSGSLLEKQPPWIVVDVHGVGYELETSMNTLVALPAPGESVSLYTHLTIRDDAHLL
YGFAREHERALFRALIKVNGVGPKLALAILSGMDEEAFMRCVRDDDSKALTKLPGVGKKT
AERLIIEMRDRFPEWENGSHAPLALEATSGRPAPRDSFADAEAALVSLGYKLTEASKMLA
DINPNQSTEALIKAALTNRMNG
NT seq 609 nt   +upstreamnt  +downstreamnt
atgattggtcgtttgagcggttctctgctggaaaagcaacccccgtggattgtggtcgac
gttcacggtgttggctatgagttagagacctcaatgaataccctagtagcactgcctgct
cccggggagagcgtttcactctatacccaccttactattcgcgatgatgctcatcttctt
tacggctttgcccgagaacacgagcgcgccctgtttcgcgccctgatcaaggttaatggc
gttggccctaagctagcgttagctatcctctctgggatggacgaagaggcttttatgcgc
tgtgttagagacgatgatagtaaagcgctgaccaaactccctggggtgggcaaaaaaacc
gcagaacgcttgatcattgaaatgcgcgaccgcttccccgaatgggaaaatggcagtcat
gcacctctagcgctggaagcgacaagtggccgcccagcccctcgggatagctttgcagat
gctgaagctgcgctggttagcctgggttataagctaacagaggcatctaaaatgttggct
gatattaatcctaatcaatcaacagaagcgctgatcaaagcggctctaacgaatcgtatg
aacgggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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