KEGG   Halomonas sp. GFAJ-1: BB497_15185
Entry
BB497_15185       CDS       T05375                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
hag  Halomonas sp. GFAJ-1
Pathway
hag00740  Riboflavin metabolism
hag01100  Metabolic pathways
hag01110  Biosynthesis of secondary metabolites
hag01240  Biosynthesis of cofactors
hag02024  Quorum sensing
Module
hag_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:hag00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    BB497_15185
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BB497_15185
Enzymes [BR:hag01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     BB497_15185
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     BB497_15185
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Peptidase_M17
Other DBs
NCBI-ProteinID: AVI63955
UniProt: H0J257
Position
complement(3369635..3370804)
AA seq 389 aa
MGAEPRHAAFSLQDHKYMARALQLAKQGLYTTDPNPRVGCVIVRYDESDEGRVVGEGFHI
SAGGPHAEIHALNAAAGLARGATAYVTLEPCSHTGRTGPCAVALAEAKVSRVVVAMVDPN
PQVSGQGIKRLQADGVTVDVGLLEADARALNPGFISRMQHKRPFVRLKMAMSLDGRTAMG
SGESQWITGPEARSQVQRLRARSSAILSGVESLIMDDSRLTLRADQLALANADEVVKRQP
LRVILDSRLRLPLAAACLREPGRTLLITTEQHSEEKRHKLEAAGAEIVVFPADQGGRIAL
ADMLHWLADNEQVNELLVETGATLAGALLDANLVNELQLFVAPTLLGGEARPLFALPGLT
RMADQKRLTIKEMRAVGRDWHIIAEPDAD
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgggcgctgagccacgccacgctgcgttctccctacaagatcataagtacatggcgcgg
gcgcttcagctcgccaagcaagggctttataccaccgacccaaacccccgcgtgggctgc
gttatcgtccgctatgatgaaagcgatgaggggcgagtagtgggtgaaggctttcacatc
agtgccggcggccctcacgctgaaatacacgcactaaacgcagcggctggcttagcccgc
ggggcaaccgcatacgttacgctggaaccctgctcccataccggccgcactgggccatgc
gcggtggcgttggcagaggccaaggtctcccgtgtggttgtcgcgatggtcgatcccaat
ccacaggtaagtgggcaaggtattaagcggctacaagccgatggggtaacagttgatgta
ggccttttggaagcggatgcacgggcgctaaaccctggttttatttcccgtatgcaacat
aagcgcccctttgtgcggcttaaaatggcgatgagccttgatgggcgtacggcgatgggg
tcaggtgagtcccaatggattaccggccccgaagcgcgtagtcaggtacagcggttacgg
gcgcgttccagcgctattttaagtggcgttgagtcgttgattatggacgattcacggcta
accttgcgggccgaccagctggcgctggcgaatgccgatgaggtggttaaacgccaaccg
ctgcgcgttattttagactcccggctccgcttgccgctggccgccgcttgcttacgcgag
ccaggacgcacgctattgattaccaccgagcagcacagtgaagagaaacgccacaaacta
gaagcggcgggcgcggaaatagtggtgtttcctgccgaccaaggggggcgtattgccctg
gctgacatgctgcactggctagccgataatgagcaggttaatgagctgctggtggaaaca
ggcgcaacgctggctggcgcgctgttagatgccaatttagttaacgaactgcagttattt
gtcgcccccacgctgcttggtggtgaagccaggccgctgtttgccctgccggggttaacc
cgcatggcagaccaaaagcggctgacgattaaagagatgcgcgcggttgggcgtgactgg
cacattattgccgaacctgatgctgactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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