KEGG T01603: Halar

Halophilic archaeon DL31: Halar_1233

Entry

Halar_1233        CDS       T01603

Name

(GenBank) UvrD/REP helicase

K16898

ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]

Organism

hah Halophilic archaeon DL31

Brite

KEGG Orthology (KO) [BR:hah00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hah03400]
    Halar_1233
Enzymes [BR:hah01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Halar_1233
DNA repair and recombination proteins [BR:hah03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Halar_1233

SSDB

Motif

Pfam:

UvrD-helicase PDDEXK_1 AAA_19 AAA_30 UvrD_C_2 AAA_22 UvrD_C Viral_helicase1 AAA_11 PhoH

Other DBs

NCBI-ProteinID:

AEN04983

Position

512842..516312

AA seq 1156 aa
MTEKSSDAVGYCRLEDAQADIRDAFFATDAGLFVLDCGPGAGKSVTADSIAAEDLARKRS
AGVENPEETLCLTSFSRDDAASILPGVEEALGRLAADPEAPVTLSEESASELGAALRGSD
RVGTVDSVLGTVFEAVADEVGFDGTPTVGDGSDLAGVHGDAVELVRNDDSLVNAFDRLDG
AYPEGRYDEDVGDLLATARNACRERCFDVETLHERLLGVLEGAYPDGPPESLEDVLEDVE
RFFGPDERNAVEERLAVDPDGERDAVATADARCHDEWAAAIERFCTVLSVYLDAYDEACR
ARGVVAHVDVAHWVATFFEAEHYAGPFRERLQERYTDRLSTVVVDEAQDVSHAQHDALAP
LVDAETRVLLVGDRNQSVYAWRNAQPALFAAAFEDGEYFGIEWDTHESNRATRSYRFRPG
VAAAIDTVFESVFTDPTRGGDAKEYQPLRTVRDGTVEPNLHLAAFDGRGEPGKKRWVDPS
EGVGEAAALADCIATGLRDGRFGEDPGVTVLFQRRTHMASYIDAFADTGLTVRDTSRVLF
DHPLVGAVCAVVEWLLDPTDKSATLTLTNDDDLPLNTLIDRLMRADWSIHRVAESGSLSG
ALGRFTDGLATLADRRPTHLASAGADVVSDVIETLSLAADPFDQSSAATDDTAVLDRLVA
TVADWEGEERYSLPQLAAALGHARRNPKSGPSLPTVGDGDVTFRTIHGAKGDEDDVVAVA
DLGDRLGRLGPQLDRFIAHGQHVALSPPANLGTGENYPELAGTVLAGGPYDPDAKPGDDS
SGLRWASQRWVPEEKRIAGPPPLSAAVTTSRAERWRLLYVALSRARDHLVLPLPTEREES
TPRDRWVDTLRDAYEFHAGRSGSYTVATPEPHEPLTVSVHSPTSPVTADMESPPGTPDTG
ESSSLPPTLTTGWTPRFVSPSTLYPLSTAPAKHVLAHLSGRALHSDHEGVDDSLPLTFET
MGPDVVGDVAHDTFAIALRDEVDTEMLRASGGPLPAAIDRAIARHASGVAPDEREQLRRY
LESSLLPAFAETSLWDRLQATDRRYVEEPLDGVVRVGDPGLAVEIGGQADIVSVDDAGEW
HVDDLKVTLTPLDESLRGRYELQAAAYAWALSRQPEVKTVTTTVTTVGTERTSWTVDAGD
ATFKRALNRLYNLNWE

NT seq 3471 nt +upstreamnt +downstreamnt
atgactgaaaaatcgtcggacgccgtgggctactgccggctcgaagatgcccaggccgac
attcgcgacgccttcttcgccaccgacgccggcctgttcgtcctcgactgtggccccggc
gcgggcaaatccgtcactgccgacagcatcgctgccgaggacctggcccgcaagcgctcg
gcgggtgtcgagaatcccgaggagacgctctgtctcacctcgttctcgcgtgacgacgcc
gcgagtatcctcccgggcgtggaggaggctcttggtaggctcgcagccgacccagaagcg
ccggtcaccctcagcgaagaatctgcatcagaactcggcgcagcactccgcgggagtgac
cgagtcggaacggtcgatagcgtcctcggaaccgtcttcgaggcggtagctgacgaagtc
gggttcgatgggacgccaactgtcggcgacggctcggacctcgcgggggtccacggcgac
gccgttgaactggttcggaacgacgacagcctcgtcaacgcgttcgaccggctcgacggc
gcctacccggagggtcggtacgacgaggatgttggtgatctccttgcgaccgctcggaac
gcctgtcgcgaacgctgtttcgacgtcgagacactacacgaacgtctcttgggtgttctc
gagggtgcgtatccggacggcccaccggagtcgctggaagacgtgctcgaggacgtcgag
cggttctttggacccgacgaacgaaacgccgtcgaggaacggctggctgtcgaccccgac
ggggagcgtgacgcggtggcaactgcggatgcgcgctgtcacgatgaatgggcggcggcc
atcgaaaggttctgtacggtgctctcggtgtacctcgacgcgtacgacgaggcctgccga
gcccgcggggtcgtcgcccacgtcgacgtggctcactgggttgccaccttcttcgaagcc
gagcactacgcggggccgttccgcgagcgccttcaggagcgctatactgaccggctctcc
acggttgttgtcgacgaggcccaggacgtttcccacgcccagcacgacgcactcgcgccc
ttggtcgacgctgagacgcgcgttctcctcgtcggtgaccgaaaccagagcgtctacgcc
tggcgcaacgcccaacccgcgctgttcgcagctgccttcgaggatggggagtatttcggc
atcgagtgggacacccacgagtccaaccgggcgacgcggagctaccggttccgccctggt
gtcgccgcagcaatcgacacggtgttcgaatcggtgttcaccgacccgacccgtggcggc
gacgcgaaggagtaccagccactcagaaccgttcgagatgggacagtggagccgaacctc
cacctcgcagccttcgatggtcgaggagaacctggcaagaaacggtgggtcgacccctca
gaaggggtgggtgaggcggcagcgctggccgactgcatcgctaccggcctgcgtgacggt
cgtttcggcgaggatccaggggtaacggtgttgttccagcgacggacccacatggccagc
tacatcgacgcgttcgccgacactgggctgacagtccgggacaccagccgggtgctgttc
gaccatccactggtcggtgccgtctgtgcggtggtggagtggctgcttgaccccactgac
aaatcggcgacgctcacgctgaccaacgacgacgatctcccgctcaacacactcatcgac
cggctgatgcgcgcggactggtcgattcaccgggtggccgagagcgggagcctctccggt
gccctcggcaggtttacggacggactcgccacgttggctgaccgccggcccacccacctt
gccagcgccggcgcagacgttgtgagcgacgtgattgagacgctctcgctggctgcggat
ccgttcgaccagagttcggctgccaccgacgacaccgccgtgctggaccgcctcgttgcc
accgtcgccgactgggagggtgaggagcgctactcgctgccccaactcgcagcagcgctg
ggtcacgcccggcggaatccgaagagcggcccgagtctccccactgtcggggacggtgac
gtaaccttccggacgattcacggcgcgaaaggcgacgaggacgacgtggtcgctgttgcc
gatttgggtgaccgcctcggccgcctcggcccgcaactggacagatttatcgcccacggt
cagcacgtggcgttatcgccacctgcaaatctgggaacgggtgagaactaccccgaactg
gcagggaccgttctcgccgggggtccatacgaccccgacgccaaaccaggcgacgacagt
tccgggcttcggtgggcgagccagcggtgggttccggaggagaaacggatcgctggcccg
ccgccgctgagtgcggccgtcacaacgagtcgggccgagcgatggcgcctgctctacgtc
gcgctttcgcgggcccgcgaccacctcgtcctcccgctcccgactgagcgtgaggagtcg
accccgcgggaccgctgggtggacacgctccgcgatgcctacgagttccacgcgggccgc
tctggtagctacacggtggccactcccgagccccatgagccactgactgtgtctgttcac
agtcccacgtcgccagtgactgctgacatggaatcgcctccggggacgccagatacaggg
gaatcatccagcctgccacctactctgaccactggctggacgccgcggttcgtcagcccg
agcacgctctacccactctcaacggcgcctgcaaagcacgtgctcgcgcatctgagtggc
cgagccctccacagtgaccacgagggtgtcgacgactcgcttccgctgacgtttgagacg
atgggtcccgatgtggtcggcgatgtcgcacacgacaccttcgccatcgcactccgggac
gaggtcgataccgaaatgcttcgcgcgagcggcgggccgcttccagccgcaatcgaccgc
gcgatcgcccggcacgcgagcggtgttgcgcctgacgagcgcgagcaactgcggcgatat
ctcgagtcgtcgttgctcccagcgtttgcggagacgtccctctgggaccggcttcaggca
accgaccggcgctacgtcgaggagccgttagacggcgtggtgcgcgtgggtgaccccgga
ctcgcggtcgaaatcggcggccaagcggatatcgtctccgtcgatgacgctggggagtgg
cacgtcgacgacctcaaagtgacactcactccactcgacgaatcgctccgcgggcgctac
gagcttcaggctgcagcgtacgcgtgggcgctcagccgccagcccgaggtaaagacggtc
accacgacggtgaccacggtcggcacagagaggacctcgtggacggtcgatgcaggagat
gcgacgttcaaacgcgcactcaatcgactttacaatctgaactgggagtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

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