KEGG   Halophilic archaeon DL31: Halar_2605
Entry
Halar_2605        CDS       T01603                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hah  Halophilic archaeon DL31
Pathway
hah03030  DNA replication
hah03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Halar_2605
   03410 Base excision repair
    Halar_2605
   03450 Non-homologous end-joining
    Halar_2605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hah03032]
    Halar_2605
   03400 DNA repair and recombination proteins [BR:hah03400]
    Halar_2605
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hah04147]
    Halar_2605
DNA replication proteins [BR:hah03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Halar_2605
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Halar_2605
DNA repair and recombination proteins [BR:hah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Halar_2605
Exosome [BR:hah04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Halar_2605
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc OrfB_IS605 DUF6381 Pox_G5 LAX
Other DBs
NCBI-ProteinID: AEN06256
Position
1811240..1812220
AA seq 326 aa
MGNADLRAVAAIEDIPFSELSGSVVAVDAHNWLYRYLTTTVKFTADSVYTTSDGDEVANL
LGVVQGLPKFFEADMTPVLVFDGGVTDLKSDEVERRREQRKKAEERKQEAEEAGDSVEAA
RLEARTQRLTDTIHETTRGLLDRLDVPYIEAPAEGEAQCAHMAATGEVDYAGSEDYDTMT
FGAPRTLRQLTSKGHPELMDLQKTLEKHDISYEQLVDVALLMGTDFNEGVTGYGPKTAVK
AVKEHGDIWGVMEAEDVYVANADRVRELFFDPPVTDDYELDLDIDPDLDAARAYVSAEWE
VPAEEVERGFERIEESLVQTGLDDWT
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggcaacgcggacttacgcgcggtcgcggccatcgaggacatccccttctcggagttg
tcggggagtgtcgtcgccgtcgacgcgcacaactggctctatcgctatctcacgacgacg
gtgaagttcaccgccgactcggtgtacaccaccagcgacggcgacgaggttgcgaacctc
ctcggcgtcgtccaggggctcccgaagttctttgaggccgacatgacgcctgtgctggtc
ttcgacggtggggtcaccgatctcaagagcgacgaggtcgagcgccgccgggagcagcgc
aagaaggcagaggagcgcaagcaggaagccgaggaggctggcgacagcgtcgaggccgcg
cggctggaagcccgcacccagcgactcaccgacacgattcacgagaccacacgcgggctg
ctcgaccgtctcgacgtgccgtacatcgaggcacctgcagagggtgaggctcagtgtgcg
cacatggccgcgactggcgaagtcgattacgccggcagcgaggactacgacacgatgacc
ttcggcgcaccgcggacgctgcgacagctcacctcgaaaggccacccggagctgatggac
ctccagaaaaccctcgagaaacacgacatcagctacgagcagttggtcgacgtggcgcta
ctgatggggacggatttcaacgagggggtcaccggatacgggcccaagaccgcagtgaaa
gccgtgaaggaacacggcgatatctggggtgtgatggaggccgaagacgtgtacgtggcc
aacgccgaccgggtgcgggagctcttcttcgacccaccggtcaccgacgactacgaactc
gacctcgacatcgatccggacctcgacgccgcacgggcgtacgtctcggcggagtgggag
gtgcccgctgaggaggtcgagcgcggcttcgagcgcatcgaggagtcgctggtccagacc
gggctcgacgactggacctaa

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