KEGG   Hipposideros armiger (great roundleaf bat): 109382848
Entry
109382848         CDS       T04661                                 
Symbol
RTCB
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
hai  Hipposideros armiger (great roundleaf bat)
Brite
KEGG Orthology (KO) [BR:hai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hai03016]
    109382848 (RTCB)
Enzymes [BR:hai01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     109382848 (RTCB)
Transfer RNA biogenesis [BR:hai03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    109382848 (RTCB)
 Prokaryotic type
   tRNA splicing ligases
    109382848 (RTCB)
SSDB
Motif
Pfam: RtcB Cu-oxidase_4
Other DBs
NCBI-GeneID: 109382848
NCBI-ProteinID: XP_019498170
EnsemblRapid: ENSHARG00000007072
UniProt: A0A8B7RFA1
Position
Unknown
AA seq 505 aa
MSRNYNDELQFLEKIDKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDI
NCGVRLLRTNLDEGDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNE
YAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS
PEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQ
HVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTDQGMT
ETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTD
VVNTCHDAGISKKAIKLRPIAVIKG
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgagtcgcaactacaacgatgagctgcagttcttggaaaagatcgataaaaactgctgg
agaatcaagaagggcttcgtgcccaacatgcaggttgaaggagttttctatgtgaatgat
gctctggaaaaattaatgtttgaagaattaaggaatgcctgtcgaggtggcggtgttggt
ggcttcctgcctgccatgaaacaaattggcaatgtggcagccctgcctgggattgttcat
cgatctattgggcttcctgatgtccattcaggttatgggtttgctattgggaatatggca
gcctttgatatgaatgaccctgaagcggtggtgtccccaggtggtgtcggatttgacatc
aactgtggtgtccgcttgttaagaaccaatttagatgaaggtgatgtgcagcccgtgaag
gagcaacttgcccaggctatgtttgaccacattcctgttggggtgggatccaaaggtgtc
atcccgatgaatgccaaggacttggaggaggcgttggagatgggcgtggactggtccctg
agagaaggctatgcctgggctgaagacaaggagcactgtgaggagtacggaaggatgctg
caagctgaccccaataaggtctccgcaagggccaaaaaaagaggccttcctcagctgggg
accctgggagcaggtaaccactatgcagaaatccaggttgtggatgagattttcaatgag
tacgctgctaagaaaatgggcatcgaccataaaggacaggtgtgtgtgatgatccacagc
ggaagcagaggcctgggccaccaggtagccacagatgccctggttgctatggaaaaggcc
atgaagagagacaagattatagtcaacgaccgtcagttggcctgcgcgcgaattgcctct
cccgagggtcaggactacctgaagggcatggcggcagctgggaactatgcctgggtcaac
cgctcttccatgaccttcttaacccgtcaggcttttgccaaggtcttcaacacaacccct
gatgacctggacctccacgtgatctatgatgtttctcacaatatcgccaaagtggaacag
catgtggtggacggaaaggagcggacgctgctagtccaccggaaggggtccacccgcgct
ttcccccctcaccaccccctcattgctgttgattaccagctcactggacaaccagtgctc
attggtggcaccatgggaacctgcagttacgttcttactggcaccgaccagggcatgacc
gagacctttggaaccacctgtcatggagcgggccgtgcattgtcccgagcaaaatcgcga
cgtaatttagatttccaggatgtcttagacaaattggcagatatggggattgcaatccgt
gttgcctcacccaaactggttatggaagaggctcctgagtcctataagaacgtgaccgat
gtggtgaacacctgccatgatgctggaatcagcaagaaggccattaaactgagaccgatt
gccgttatcaaaggatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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