KEGG   Halomonas sp. KO116: KO116_02973
Entry
KO116_02973       CDS       T03800                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hak  Halomonas sp. KO116
Pathway
hak03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KO116_02973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hak03019]
    KO116_02973
Messenger RNA biogenesis [BR:hak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     KO116_02973
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AJY51446
UniProt: A0A0D5M5N1
Position
complement(3197873..3198379)
AA seq 168 aa
MKVMSVIDADGFRPNVGIIIANSQGQLLWARRVGQNAWQFPQGGINASETPQQALFRELY
EEIGLTAGDVDIVACTRGWLRYRLPRRMIRTHSRPVCIGQKQKWFLLKIRCQESQICMTA
TPTPEFDGWRWVSYWYPLGQVVPFKREVYRRALRELSPRAQRLAQDDD
NT seq 507 nt   +upstreamnt  +downstreamnt
atgaaggtgatgtccgtgatcgacgctgacggctttcgccccaatgttggcattatcatt
gccaacagccaggggcagctgctttgggcgcgtcgggtaggacaaaatgcgtggcaattt
ccccaggggggcatcaatgcaagcgagacgccacaacaagcactttttcgtgagctttac
gaagagatcggcttaaccgccggtgatgttgatattgttgcctgcacccggggctggcta
cgctaccgtctgccacgacgcatgattcgcacacattcgcgtccggtctgcataggccag
aagcaaaagtggtttttacttaaaatccgttgccaggaaagccaaatctgtatgacggca
accccaacacctgaatttgatgggtggcggtgggtgagctactggtacccgctagggcag
gtagtaccttttaaaagagaggtgtatcggcgcgcgttgcgagaattgtctccccgcgct
cagcgcctggcacaggatgacgattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system