KEGG   Halomonas sp. KO116: KO116_04157
Entry
KO116_04157       CDS       T03800                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
hak  Halomonas sp. KO116
Pathway
hak03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KO116_04157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hak03021]
    KO116_04157
   03400 DNA repair and recombination proteins [BR:hak03400]
    KO116_04157
Enzymes [BR:hak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KO116_04157
Transcription machinery [BR:hak03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     KO116_04157
DNA repair and recombination proteins [BR:hak03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      KO116_04157
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD Acyl-CoA-dh_C
Other DBs
NCBI-ProteinID: AJY52618
UniProt: A0A0D5M9W6
Position
complement(4490110..4491105)
AA seq 331 aa
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEAE
IAGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLTLNKQGPAVVTAGDIALDHS
VEIVNPDHIIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDHVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgcagcgttcagtgacagagtttctacgtcctcgcgacatcaaggtcgaagaaatcagc
gcacatcacgccaaaatcgtgctcgaaccgttcgagcgtggctttggtcacaccctgggg
aatgcactgcgtcgcattctgctttcgtctatgcccggctgtgccgtggtagaggctgaa
attgctggcgtcgagcatgaatacagtgcgctcgaaggggtgcaggaagatgtcattgaa
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgatgaggcggtgctc
acgctgaacaagcagggcccagccgtcgtcaccgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggaccacatcattgctcatgtcaatgaaggtgccgagctgaaa
attcagcttaaggtagcgctgggtcgtggctacgaaccggctgacgcgcgtggctctgat
gaagagacgcgtgccattggccgcctgcagctggatgccaccttcagccctgtccgccgt
gtttcctactcggttgaagccgctcgcgtagagcagcgcaccgacctcgataagttaatt
atcgatctggaaaccgacggtaccctggatccggaagaggctatccgtcgcagtgcgacc
atcctgcaagagcagctggccgccttcgtcgacctggaagctgataaagaacaggaagtc
gaagaggaagaggatcatgttgatccaattctattgcgccccgtagacgatcttgagttg
accgttcgcagcgcgaactgcctaaaagccgagaatatttattacatcggtgatcttatc
cagcgcacagaagttgagctgttgaagacaccgaatctcggtaagaaatctttgaatgaa
atcaaagacgtattggcggctcgcggcttgtcccttggcatgcggttggaaaattggcca
ccggcaagcctgaaggacgacaaagcctccgcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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