KEGG   Halobacterium salinarum NRC-1: tbpC
Entry
tbpC              CDS       T00038                                 
Symbol
tbpC
Name
(GenBank) TbpC
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hal  Halobacterium salinarum NRC-1
Pathway
hal03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    tbpC (tbpC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hal03000]
    tbpC (tbpC)
   03021 Transcription machinery [BR:hal03021]
    tbpC (tbpC)
Transcription factors [BR:hal03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    tbpC (tbpC)
Transcription machinery [BR:hal03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     tbpC (tbpC)
  RNA polymerase III system
    TFIIIB
     tbpC (tbpC)
  RNA polymerase I system
    SL1/TIF-1B
     tbpC (tbpC)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-ProteinID: AAC82884
UniProt: O52004
Position
pNRC100:111987..112532
AA seq 181 aa
MTVEIANIVGSGDLGVELDVEPLEADLSTPYSEYDPSNYHGLYVRLEENGPLITVYRSGK
YIITGCASMESLHETNEEFLGMLADLGVTEEDTQTGFTVENVVCTAMLDELVSLNALAIG
LGLEVTEYEPEQFPGLVYRPEEIGAVLLVFANGKMVITGAKDTETAESAYEYFQSKVQEL
V
NT seq 546 nt   +upstreamnt  +downstreamnt
atgacggtcgagattgcgaacatcgttggctccggcgatcttggagtggagctggatgtt
gagcccttggaagctgacttgtccacgccgtattcagagtacgatccatcgaactaccac
ggcctctacgttcgtctcgaagaaaacggaccactcatcacggtatatcggagcgggaag
tacatcatcaccgggtgcgccagtatggagtcgctgcacgagacgaatgaggagttcttg
gggatgcttgcggatctaggtgtgaccgaggaagacacgcagaccgggttcaccgtcgag
aacgtcgtttgtacggcgatgcttgacgagctagtttctctgaatgccctcgcaatcgga
ctaggattggaagtgacggagtacgagcctgagcagttcccaggacttgtctaccgaccc
gaggagatcggtgccgtgttgctagtattcgctaacgggaagatggttatcacgggagcc
aaagacaccgaaacggctgaatcagcgtatgagtactttcagtcgaaagtccaagaatta
gtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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