KEGG   Halorhabdus sp. CBA1104: Hrd1104_01995
Entry
Hrd1104_01995     CDS       T06289                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
hala  Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:hala00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hala03016]
    Hrd1104_01995 (truD)
Enzymes [BR:hala01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Hrd1104_01995 (truD)
Transfer RNA biogenesis [BR:hala03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Hrd1104_01995 (truD)
 Prokaryotic type
    Hrd1104_01995 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: QGN06182
UniProt: A0A650A1F5
Position
complement(362946..364298)
AA seq 450 aa
MRQAHPLEQAVGMAYYVSDSDGVGGHLRREPAAFAVREIEAFDVESIDAERGAYPHVVFR
ATLSGWDTNDFANVLSDQLSISRERVSWAGTKDKHARTTQLFSATKVDPGALDGIDLSEV
EIEVLGRSGRPILFGDLAGNAFEIVVSEPDSPDRIEAVVDELATFAGSGFDGEGDATTVG
VPNFFGQQRFGSERPVTHEVGLAIARGDWKAAVLAYVGNPHEREREETREARAYVTETED
WAGALDRLPNRLGYERSMCHRLAENGANEPDDFRDALEAVPTNLQQLFVNAAQSYAFNRI
LSARLERGLPFDEPVAGDVVCFADSDAPDGLELPDTDRIQRVTEDNVGTVRRHCERGRAF
VTAPLLGSESELADGEPGEIERAVFDELGISPADFDLPGEFHSEGTRRAMLLRTALAVER
DPLTLSFALPKGSYATVVLREITKADPAAL
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgccaggcacacccactcgagcaagcggtcgggatggcatactacgtcagcgatagc
gacggcgtcggcgggcacctccgccgtgagcccgcagccttcgctgtccgcgagatcgag
gctttcgacgtcgagtcgatcgatgccgagcgcggggcatatccccatgtcgtctttcgg
gcgaccctctcggggtgggacacgaacgacttcgcaaacgtcctctccgatcagctgtcg
attagccgcgaacgtgtctcctgggccgggacgaaagacaaacacgcccggacgacccag
ctgttctccgccacgaaagtcgatcctggggctctcgatgggatcgacctctcggaagtc
gagatcgaagtcttgggtcgaagcggcagaccgatcctctttggcgatctggccggcaac
gcgttcgaaatcgtcgtcagcgaaccggacagtccagaccggattgaagccgtcgtcgac
gaactcgccacgttcgccggcagtggattcgacggcgagggcgacgcgacgaccgtcggc
gtgcccaacttcttcggccagcaacggttcggcagcgagcggccggtcacccacgaggtc
ggcctcgccatcgcccggggcgactggaaagctgcggttctcgcctacgtcggaaatcca
cacgagcgtgagcgcgaggaaacccgtgaggcgcgggcatacgttacggaaacagaggac
tgggcgggcgcactcgaccggttgccaaaccggctgggctacgaacggtcgatgtgccat
cgtctggccgagaacggggccaacgagccagacgacttccgggacgccttggaggccgtc
ccgacgaatctccagcagctgttcgtcaacgccgcccagtcctatgcgttcaatcgtatc
ctctcggcacggctggaacgtggcctgcccttcgacgagccggtggccggcgacgtggtt
tgtttcgccgacagcgacgctcctgacggactcgaactgccggacaccgatcggatccag
cgtgtgaccgaagataatgtcgggacagttcgccgacactgtgagcgcggccgagcgttc
gtgactgcaccgctgctcgggtcggaaagtgagcttgcggacggtgagcctggtgagatc
gagcgggctgtcttcgacgagttgggaatcagtccggcggacttcgaccttccgggagag
ttccactcggaggggacgcgacgggcgatgttgctgcggacggctctggctgtcgagcgc
gatccgctgacgctctcgtttgcgctcccgaaaggttcctatgcgacggtcgtcctccgg
gagatcacgaaggcagatccagcagccctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system