KEGG   Haloferax alexandrinus: G3A49_16185
Entry
G3A49_16185       CDS       T06450                                 
Name
(GenBank) transcription factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hale  Haloferax alexandrinus
Pathway
hale03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hale00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    G3A49_16185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hale03000]
    G3A49_16185
   03021 Transcription machinery [BR:hale03021]
    G3A49_16185
Transcription factors [BR:hale03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    G3A49_16185
Transcription machinery [BR:hale03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     G3A49_16185
  RNA polymerase III system
    TFIIIB
     G3A49_16185
  RNA polymerase I system
    SL1/TIF-1B
     G3A49_16185
SSDB
Motif
Pfam: TBP DUF5929 Exog_C
Other DBs
NCBI-ProteinID: QIB79557
UniProt: A0A6C0UWM3
Position
3270653..3271201
AA seq 182 aa
MELVSTMGTGSLGRELDLDPLISDLELQHGEVVNANFRGDAMVTIRLEEGGPAYTLYRTG
SFQIRGAKTEEKLVRAEKRFREALDELDIEVDDYEFEHVTSVFMETLDQKVDLETAMIAL
GLENAEYEPEQFPGLIYRPPSFDVSLLVFASGKIIIGGTTDRDQALDAIDHLREQLSTIE
RV
NT seq 549 nt   +upstreamnt  +downstreamnt
atggaactcgttagtacaatgggaaccggttcacttgggcgggaactggacttagatcct
cttattagcgatcttgagttacaacatggtgaggtagtgaacgcgaattttcgtggggac
gctatggtgacgattcgattggaagaaggtgggcctgcttacacgctctaccgaactggg
tcattccaaattcggggtgccaagactgaagagaagctagtcagggctgagaaacgtttc
cgagaggcactagatgaacttgatattgaggtagacgattacgagtttgaacacgtgact
tcggtgttcatggagactcttgatcaaaaggtagatcttgaaactgcgatgattgctctt
ggtctggaaaatgccgaatacgagccagaacaattcccagggctcatttatcgacctccc
tctttcgatgtctccttgctggtcttcgcaagcgggaagatcatcattggtggaactact
gacagggaccaagcccttgatgccatagatcacctacgagaacagttgagtaccatagaa
cgcgtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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