KEGG   Vreelandella alkaliphila: CUU95_05210
Entry
CUU95_05210       CDS       T05720                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
halk  Vreelandella alkaliphila
Pathway
halk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:halk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CUU95_05210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halk03400]
    CUU95_05210
DNA repair and recombination proteins [BR:halk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CUU95_05210
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CUU95_05210
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_16 RsgA_GTPase DnaJ_CXXCXGXG AAA_22 BCA_ABC_TP_C nSTAND3 AAA_23 T2SSE APS_kinase Viral_helicase1 NACHT IIGP AAA_21 RPS31 ExoX-like_C
Other DBs
NCBI-ProteinID: AYF33263
UniProt: A0A386WZ47
Position
1109490..1112339
AA seq 949 aa
MDSILVRGARTHNLKQIDVELPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGTPRC
PEHGEELEAQTISQMVDQVMNLAEGTKLMLLAPVVKGRKGEHLQLLAELRAQGFVRVQVD
GQVLELDDIAPLDKRKKHDISVVVDRFKVRDDIAQRLAESFETAINLADGTAMIHFMDGD
QEDLAFSARFACPVCGYSLSELEPRMFSFNNPAGACPTCDGLGVQQYFDPDKLISHPELS
LAEGVIKGWDRRNIYYFTQLQALAKHYQFELETPWIELASHEREIILNGSGSEQIPFVYV
GDRGRKVTREHAFEGVLPNMQRRYRETESNMVRDDLAKYIAVQPCATCGGSRLRKESRHV
FVDDHNIADIVHLPIGEAWRYFAELSLPGRKGEIADKIVNEIHARLEFLVNVGLDYLNLE
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLKTLERLRDLGNTV
IVVEHDEDAIRAADHVLDIGPGAGVHGGEIVAQGTPQDVMDNPNSLTGQYLSGTREIAVP
PYRIPGNPEKQLVVRGATGNNLQNVTLSLPLGLFIAVTGVSGSGKSTLINGTLMPIAARE
LNRATTLTPAPYEKVEGLDQLDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQEA
RSRGYKPGRFSFNVKGGRCEACQGEGMIKVEMHFLPDIYVPCDVCKGKRYNRETLDIHYK
GKTIHEVLAMTVEDALEFFSPVPAIARRLQTLLDVGLSYIRLGQSATTLSGGEAQRVKLA
RELAKRDTGKTLYILDEPTTGLHFEDIRQLLTVLHRLRDHGNTIVVIEHNLDVIKTADWI
IDLGPEGGSGGGQIIAEGTPEQIAKQSVSHTGHFLAPLLKRGNRAKKTA
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggacagcattctggtcaggggtgcacgcacccacaacctcaagcagatcgatgtggag
ctgccccgcgacaaacttatcgtcattaccggtctttccggctcaggtaagtcgtcgctg
gcgttcgatacgctctacgctgaggggcaacgccgctatgtggagtcgctttccacctat
gcgcgtcagttcctttcgatgatggaaaagcccgatgtggatcacatcgaagggctttcg
cctgcgatctctattgagcagaaatccacgtcccacaacccccgttctaccgtcggcacg
attaccgagatttacgactacttgcgcctactatttgcccgggcaggcacacctcgttgc
cctgaacacggcgaagaactggaagcgcaaactatttcccagatggtcgaccaagtcatg
aacttggccgaaggcaccaaattgatgctgctggcgccggtggtaaaaggtcggaaaggg
gagcatctgcagctactggcagaacttcgggctcaaggcttcgtcagggttcaggttgat
gggcaagtacttgaacttgacgatattgccccgctcgacaagcgcaaaaaacatgatatc
agcgtggtggttgaccgctttaaagtgcgtgatgatattgcccagcgtctagcagaatcg
tttgaaaccgcaattaatctcgccgacggcacggcgatgatccactttatggatggtgat
caggaagaccttgccttttcagcacgctttgcctgcccggtgtgtggctattcgctttct
gagcttgagccgcgaatgttttcgttcaacaacccggcgggagcttgccccacctgtgat
ggcttaggcgttcagcaatattttgaccccgacaagttgattagccacccagaactatcg
ctagcagaaggcgtgattaaaggttgggatcggcgcaacatttattactttacccaactg
caggcgctggctaaacattatcagtttgagcttgaaacgccatggattgagctggcaagc
catgagcgtgagattattttaaatggcagtggcagcgaacagattccctttgtgtatgtg
ggtgaccgtggccgcaaggtaacgcgcgagcatgcttttgaaggcgtattacccaatatg
cagcgtcgctatcgggaaaccgaatccaacatggtgcgtgacgatctggctaagtacatc
gccgtgcagccatgcgccacctgtggtggctcgcggctgcgcaaagagtcacgccatgta
tttgtcgatgaccataacattgccgatattgtgcacttacctatcggtgaggcatggcgc
tactttgccgagctttccctaccgggccgcaaaggcgagattgccgataagatcgttaac
gaaattcatgcccggctagagtttttggttaacgtagggctcgactacctgaacctggag
cgcagtgctgacacgctctcggggggcgaagcacagcgtatccgtctcgccagccaaatt
ggcgcggggctggtgggcgtgatgtacattctggacgagccctccatcggcctgcaccag
cgggataacgaccgtctgttgaaaaccctggagcgccttcgcgacctgggcaacaccgtg
atcgtggttgagcacgacgaagacgccattcgcgctgcggaccatgtactcgacatcggt
cctggtgcaggtgtccatggtggcgaaattgtcgctcagggcacgcctcaagacgtgatg
gacaaccccaattcgctgaccggccagtacttgtcgggaacgcgggaaatcgctgtgccc
ccctaccgcattcccggcaatccggaaaagcagctggtggtgcgcggcgcgacgggcaat
aacctgcaaaacgtcacgctcagcctgccgctggggctgtttattgccgtcacgggggtt
tccggctcgggcaagtcgacgctgatcaacggcaccctgatgccgatcgcggcccgcgaa
cttaaccgcgccactaccttgaccccggctccctatgagaaggtagaggggcttgatcag
ctcgataaagtgatcgatattgaccagagtcctatcggtcgtacgccgcgctcaaaccca
gctacctataccggtattttcaccccgattcgtgagctgtttgcgggcactcaggaagcg
cgttcgcgaggctacaagccaggccggttcagctttaacgttaaaggcggccgctgcgaa
gcgtgccagggcgaaggcatgatcaaggtagagatgcactttctaccggatatttatgtg
ccctgtgatgtgtgtaaaggcaaacgctacaaccgcgaaacgttggatatccactataaa
ggcaaaacgattcacgaagtgctggccatgacggtagaggacgccctggagttcttcagc
ccagtgcctgctatcgctcgtcgtttgcaaaccctgttggatgtaggcctctcctatatc
cgcctagggcaaagtgccactaccctttctggcggtgaagcgcagcgtgtcaaactggcc
cgtgagctagccaagcgtgacaccggaaaaacgctctatatattggatgagcccaccact
ggcctgcattttgaggatatccgtcagctactcacggtactccaccgcttacgtgatcac
ggcaataccattgtggtgatcgagcacaacctggatgtgatcaaaacggctgactggatt
attgatcttggcccagaaggtggctctggcggtggacaaattattgccgaaggaacacca
gaacagattgccaagcagagcgtttcccatacagggcatttcctggcaccgttgttaaaa
cgtggtaatcgtgccaaaaaaaccgcctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (28)   

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