KEGG   Haloprofundus sp. MHR1: FCF25_08620
Entry
FCF25_08620       CDS       T05952                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
halm  Haloprofundus sp. MHR1
Pathway
halm03030  DNA replication
halm03410  Base excision repair
halm03420  Nucleotide excision repair
halm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:halm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FCF25_08620
   03410 Base excision repair
    FCF25_08620
   03420 Nucleotide excision repair
    FCF25_08620
   03430 Mismatch repair
    FCF25_08620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halm03032]
    FCF25_08620
   03400 DNA repair and recombination proteins [BR:halm03400]
    FCF25_08620
DNA replication proteins [BR:halm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    FCF25_08620
DNA repair and recombination proteins [BR:halm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FCF25_08620
   MMR (mismatch excision repair)
    Other MMR factors
     FCF25_08620
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    FCF25_08620
SSDB
Motif
Pfam: PCNA_N PCNA_C PA14
Other DBs
NCBI-ProteinID: QCJ47174
UniProt: A0A4D7H7U8
Position
complement(1704705..1705448)
AA seq 247 aa
MFTAVASADTLSKTLDPVGTLVDECRIHLDAEGLRISAMDPATVGVVELALDREAFESYE
ADGGVVGVDVERLDSVVGMANSDDLVHLELDEETRQLRIRVGGLEYTLALVDPDAIRAEP
DLDALELPASAVVEGRQFDQAIRAAEMVSTHVAVGVDESGENLYVDAEGDVDTVHYELDD
DDLVDLEVAPAHSLFSLDYLADMNRVVPTDAELTLELGEEYPMRLSYVYADGSGEVLYFL
APRIQSR
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcactgcagtcgccagcgcggacacgctctcgaagacgctcgaccccgtcggcacc
cttgtcgacgagtgtcggattcacctcgacgccgagggcttgcgaatctcggcgatggac
cccgcgacggtcggcgtggtcgaactcgccctcgaccgggaggccttcgagtcctacgag
gccgacggcggtgtcgtcggtgtcgacgtggagcgactcgatagcgtggtcgggatggcg
aactcggacgaccttgtccacctcgaactcgacgaggagacgcgacaactccggattcga
gtcggcggcttggagtacacactcgcgctcgtcgaccccgacgcgattcgagcggaaccg
gacctcgacgcactcgaactgccagccagcgccgtcgtggagggacggcagttcgaccaa
gcgatacgagccgccgagatggtctcgacgcacgtcgccgtcggcgtcgacgaaagtggc
gaaaatctgtacgtggacgcggagggcgatgtggatacggtccactacgaactggacgac
gacgacctcgtagacctcgaagttgccccggcgcactcgctgttctcactcgactatctc
gccgatatgaatcgcgtcgttcccacggacgcggaactgacgctcgaactcggtgaggag
tacccgatgcgactgagttacgtctacgccgacggcagtggggaggtgctgtacttcctc
gcgccgcggatacagagtcggtga

DBGET integrated database retrieval system