KEGG   Haloprofundus sp. MHR1: FCF25_14250
Entry
FCF25_14250       CDS       T05952                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
halm  Haloprofundus sp. MHR1
Pathway
halm03022  Basal transcription factors
halm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:halm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FCF25_14250
  09124 Replication and repair
   03420 Nucleotide excision repair
    FCF25_14250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:halm03021]
    FCF25_14250
   03400 DNA repair and recombination proteins [BR:halm03400]
    FCF25_14250
Enzymes [BR:halm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     FCF25_14250
Transcription machinery [BR:halm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FCF25_14250
DNA repair and recombination proteins [BR:halm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FCF25_14250
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII PhoH SLFN-g3_helicase AAA_25 nSTAND3
Other DBs
NCBI-ProteinID: QCJ48212
UniProt: A0A4D7HHI4
Position
2805520..2807850
AA seq 776 aa
MTWREVFGHDEPYPEQADGIETAVETAEDGGFTVVEGACGTGKTMLALTAGIDRVRDPDS
PFERVVVLTSVKQQLRQFEDDLRTVNANLPDEWRPVSGLTLVGKSDVCPYSRERVAGVDD
SNVYERCEGLRERTRNLAAESGPTTASALAGEARRAQTGLADTGAGGPSYLQTADEPTPY
LPELPEHGDTEFCPFYAQFLDDLPEDGEPIEAVPFDFEDAGLLEPDDLVSLSAGFGTCPH
STMGAVLPHVEVVLGNYYHAFDPTTVATFTASLIDETTFLVCDEAHMLEPRVRDLVSSGV
GDRSLRDAENEVTRVIQPVEFDDAGRETRGSTADADLVRGELKKSDVTLRELKETREFLR
DLREELDRRVVEHLDGEMPDWRADLTRLDDAEIPLRDPESPAVDEISEWAQEAGYDGGTW
VRVETVGAVVGRILNSAEEDDKQRAAPGVGRVLGEWYRCDHERYFRELELERTWDEMEPP
DSWRRAYNARLALYNCVPSDAIGERLAEFGGGVLMSATLAPMDIFRTVSGLDSLAESGRP
VEERTYGLTFPEENRASFAVDAPKFTYANRGAPDEENPTRQAYEDAVSEVARSPGNVLVG
MPSYGEAEWMAGVLDRRVDKPVLLDESSDDGTTESLKAEFFGGGGKVLVTSLRGTLTEGV
DYRGDRLSAAVVCGVPLVNTSSPRTKAVKTAYDRAFEGSGFETALTVPAVRKARQAVGRV
IRGDDEVGVRVFVDARYARESWNGVREYFPGYEREEFQPVSPDMLGFGLERFWSGR
NT seq 2331 nt   +upstreamnt  +downstreamnt
gtgacctggcgcgaggtgttcggacatgacgagccgtatcccgagcaggccgacggcatc
gaaaccgccgtcgagacggccgaagacggcggattcaccgtcgtcgaaggcgcctgcgga
actggcaagacgatgctcgcgctgacggcgggcatcgaccgggtgcgcgaccccgactcg
ccgttcgagcgcgtcgtcgtcctcaccagcgtcaaacagcaactccggcagttcgaagac
gacctccggaccgtcaacgcgaacctccccgacgagtggcgaccggtgtcggggctgacg
ctcgtcggcaagtccgacgtctgcccgtacagccgagagcgcgtcgcgggcgtcgacgac
tcgaacgtctacgagcgctgcgagggcctccgcgaacgaaccagaaacctcgctgcagag
agcgggccgaccaccgcgtcggcgctggcgggcgaggcgcgacgcgcccagaccggcctc
gccgacaccggcgcgggcggtccctcgtacctccagacggcggacgaaccgacgccgtac
ctccccgagctgcccgagcacggcgacaccgagttctgccccttctacgcgcagttcctc
gacgacctgcccgaggacggcgaaccgatcgaggcggtgccgttcgacttcgaggacgcc
ggactgctggagccggacgacctcgtctcgctctccgcgggcttcggcacctgcccccac
tcgacgatgggcgcggtgctcccccacgtcgaggtcgtcctcggcaactactaccacgcg
ttcgacccgacgacggtggcgacgtttacggcctccctgatcgacgagacgacgtttctc
gtctgcgacgaggcgcacatgctcgaaccgcgcgtccgcgacctcgtcagttcgggcgtc
ggcgaccggagcctccgcgacgccgagaacgaggtgacgcgcgtcatccaacccgtcgag
ttcgatgacgcgggcagagagacgcgcgggtcgaccgccgacgccgacctcgtccgcggc
gaactgaagaagagcgacgtgacgcttcgagagctgaaagagacgcgcgagttcctccgc
gacctgcgcgaggaactcgaccgccgcgtcgtcgagcacctcgacggcgagatgcccgat
tggagggcggacctcacgaggctcgacgacgccgaaatcccgctccgagaccccgaatca
cccgcggtcgacgagataagcgagtgggcccaggaggccggctacgacggcgggacgtgg
gtgcgcgtcgaaaccgtgggagccgtcgtcggccgcatcctcaactcggccgaggaagac
gacaagcagcgggccgcgccgggcgtcggccgcgtgctcggcgagtggtaccgctgcgac
cacgagcgctacttccgcgaactcgaactggagcggacgtgggacgagatggagccgccg
gactcgtggcggcgggcgtacaacgcgcgcctcgcgctctacaactgcgtcccctccgac
gctatcggcgagcgactcgccgagttcggcggcggcgtcctgatgagtgcgacgctcgcg
ccgatggatatctttcggaccgtctcgggactcgactcgctggccgagtccggccgcccg
gtcgaagagcggacgtacgggctgacgttccccgaggagaaccgggcgagtttcgccgtc
gacgcgccgaagttcacctacgcgaaccgcggcgcacccgacgaggagaatccgacgcga
caggcgtacgaggacgccgtctcggaggttgcacgctcgccgggcaacgttctcgtcggc
atgccgagttacggcgaggccgagtggatggccggagtgctcgaccgccgcgtcgacaag
cccgtgctcctcgacgagtcgagcgacgacgggacgaccgagtcgctgaaggcggagttc
ttcggcggcggggggaaagtgctcgtcaccagcctccgcgggaccttgacggagggcgtc
gactaccggggcgaccgcctctcggcggcggtcgtctgcggcgttccgctcgtgaacacg
tcgagtccgcggacgaaggcagtgaagacggcgtacgaccgcgccttcgaggggtcgggc
ttcgagacggcgctgacggtgccggcggtcaggaaagcgcggcaggcggtcggccgcgtc
atccgcggcgacgacgaagtcggggttcgcgtgttcgtcgacgcgcgttacgctcgcgag
tcgtggaacggcgtacgcgagtacttccccgggtacgaacgcgaggagtttcagccggtg
agccccgacatgctcgggttcgggttagagagattctggtcggggcggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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