KEGG   Halolamina sp. CBA1230: B4589_013290
Entry
B4589_013290      CDS       T06651                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
haln  Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:haln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:haln03016]
    B4589_013290 (thpR)
Enzymes [BR:haln01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     B4589_013290 (thpR)
Transfer RNA biogenesis [BR:haln03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    B4589_013290 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: QKY21298
UniProt: A0A7D4Y8D6
Position
2515458..2516033
AA seq 191 aa
MRLFFAIDLPDDLREPFAALQDDLAAAEGLNFTDPDQAHLTMKFLGDTPTEDEADEEPTV
GDAKAAGAAAVNAADLDPFEMEVGSLGAFPSEEYISVVWAGVRDGAADLESLAAALETEA
TDRGFEEADNPFTPHVTLARMNDARGKDLVQDRIRNTDPTVGRFTAEELRLKRSVLGDDG
AEHETIARFSL
NT seq 576 nt   +upstreamnt  +downstreamnt
atgcgactgttcttcgcgatcgacctgcccgacgacctccgcgagccgttcgcggcgcta
caggacgacctcgcggctgcggaggggctgaacttcaccgaccccgaccaggcgcacttg
acgatgaagtttctcggggatacccccacggaggacgaggccgacgaggagccgacggtc
ggcgacgcgaaagccgccggcgcggcggcggtcaacgcggccgatctcgacccgttcgag
atggaggtcggcagcctcggcgcgttcccgtccgaggagtacatctcggtggtctgggcg
ggcgtgcgcgacggcgccgccgacctcgaatcactcgcggccgcactcgaaacggaggcc
accgacagagggttcgaggaagcggacaaccccttcacgccccacgtcacgctcgcccgc
atgaacgacgctcgcgggaaggacctcgtgcaggaccgaatccggaacaccgatccgacg
gtcggccgcttcacggccgaggagctccgcctgaagcgctcggtcctcggcgacgacggc
gcggagcacgagacgattgcgcggttctcgctctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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