KEGG   Halomonas sp. 1513: BWR19_11825
Entry
BWR19_11825       CDS       T04761                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
halo  Halomonas sp. 1513
Pathway
halo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:halo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BWR19_11825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:halo03019]
    BWR19_11825
Enzymes [BR:halo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BWR19_11825
Messenger RNA biogenesis [BR:halo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BWR19_11825
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_30 Glyco_trans_1_4 SNF2-rel_dom AAA_19 AAA_22
Other DBs
NCBI-ProteinID: APX93566
UniProt: A0A1P8R4P1
Position
complement(2619874..2621148)
AA seq 424 aa
MSESEKTTAPAQNRKPKRRRRKPRKSQSSWDLRQFQVPPVAGKWRFHDFDLPLPLMRAIH
AQGFEYCTPIQAEALAQTLLGGDIVGKAQTGTGKTAAFLMSILAYFLEEETPNGQKPGAP
RALIVAPTRELALQIEKDAKALARFTDLNVASVVGGMDYQKQRDNLGKNLDILVATPGRL
LDFHEKRDVDLTQVEVLVLDEADRMLSMGFIPDVKRIIRHTPKKEERQTFLFSATFTEDI
LNLASQWTENPAHVEIEVTVENAADIDQRVYMVGDDDKQRLLINLLKQESFERVMVFGNR
RDLVRKLDELLRKADINVAMLSGDVPQAQRIKTLERFREGDVQVLVATDVAGRGIHIDDV
SHVINYTLPEDPEDYVHRIGRTGRAGAKGVSISFVGEEDAFSLPEIERYINDKLPCEHPP
EGLL
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgagcgagtcggaaaagaccaccgcaccggcccagaaccgcaagcccaagcgtcgtcgc
cgcaagccgcgcaagtcgcaatccagctgggatctgcgacagttccaggtcccgccggtg
gcgggcaagtggcgcttccacgacttcgatctgccgctgccgctgatgcgcgcgatccat
gcccagggcttcgaatactgcacgccgatccaggccgaggcgctggcccagaccctgctc
ggcggcgatatcgtcggcaaggcccagaccggtaccggcaagaccgcggcattcctgatg
tcgatcctggcctatttcctcgaggaggagacgcccaatggtcagaagcccggtgcgccg
cgcgccctgatcgttgcgccgacgcgcgagctggcgctgcagatcgagaaggatgccaag
gcactggcgcgcttcaccgacctcaacgtggcaagcgtggtaggcggcatggactaccag
aagcagcgcgataacctgggcaagaacctggatatcctggtcgccacgccgggacggctg
ctcgacttccatgaaaagcgtgacgtcgacctgacccaggtcgaggtgctggtgctcgac
gaggccgatcgcatgctgtcgatgggcttcattcccgacgtcaagcgcatcatccggcat
acgcccaagaaggaggagcgtcagaccttcctgttctcggcgaccttcaccgaggacatc
ctcaacctggccagccagtggaccgagaatccggcccacgtcgagatcgaagtcacggtg
gagaacgccgccgacatcgaccagcgcgtctacatggtcggcgacgacgacaagcagcgc
ctgctgatcaatctgctcaagcaggagagcttcgagcgggtgatggtgttcggcaaccgc
cgcgacctggtgcgcaagctcgatgagctgctcaggaaagccgatatcaatgtggcgatg
ctctccggcgatgtgccgcaggcccagcgcatcaagaccctcgagcgcttccgtgagggc
gacgtgcaggtgctggtggccaccgacgtggccgggcgcggcatccatatcgacgacgtc
agccacgtgatcaactacaccctgccggaggatccggaagactacgtgcaccgcatcggc
cgcaccggtcgcgccggcgccaagggtgtatcgatcagcttcgtcggcgaagaggatgcc
ttctcgctgcccgagatcgagcgctatatcaacgacaagctgccctgcgagcatccgccc
gaagggttgctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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