KEGG   Halomonas sp. R57-5: HALO1872
Entry
HALO1872          CDS       T04029                                 
Name
(GenBank) DNA polymerase III, subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ham  Halomonas sp. R57-5
Pathway
ham03030  DNA replication
ham03430  Mismatch repair
ham03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ham00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HALO1872
   03430 Mismatch repair
    HALO1872
   03440 Homologous recombination
    HALO1872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ham03032]
    HALO1872
   03400 DNA repair and recombination proteins [BR:ham03400]
    HALO1872
Enzymes [BR:ham01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HALO1872
DNA replication proteins [BR:ham03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HALO1872
DNA repair and recombination proteins [BR:ham03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HALO1872
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_22 AAA_16 AAA_5 AAA_14 AAA_18 AAA_19 AAA_2 AAA_30 nSTAND3 Mg_chelatase AAA_24 AAA_28 TsaE Rad17 Herpes_Helicase T2SSE NTPase_1
Other DBs
NCBI-ProteinID: CEP35554
UniProt: A0A0D6E8E4
Position
I:2029706..2031709
AA seq 667 aa
MSYQVLARKWRPRTFHELVGQAHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTANGRGDEGITSTPCGQCDSCQAIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPPTVLSRCLQFT
LKHMPPERVVEHLTYVLGEEHVEFDESALWLLGKAAEGSMRDAMSLTDQAIAFGQGAVRH
ADVAAMLGTLDHRHILGLAEALADVDVQRLLGEVAQLAEQGPDFAAVLDELSSMLHRLAV
AQMVPDAVDNSHGDRDVILQLASRFTAEDIQLYYQIGIQGRGDMVHAPDLRSALEMTLLR
MLAFRPQGVPKPPRTPLPLRREPSETAATQASVVEAASPAPQPAPEADTPSEAPPPESQS
KPPAEPHPQASVPAAEEKPPLQEPPPWTLETDTAASEIDAPQQAAEPAAMAEPERANEPE
PTVTPEPAAGAETVEPTTAEAPTAQPEALSEASPETQSEAIPETVPEAVPEALSGKLDNA
KWLECFDSLGLGGLTRNLAGNCLVESDDGTLLTLRLDPSQEAMQAEVHQTRIERALKEQG
IPRRIAFYVAELSNSLETPRQREERLNKERHAQAVDLLNHDPHVQKLQQAFGAKLIESSV
KPADAIR
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgagctatcaggttctggcccgcaagtggcggccgcgcacattccacgaactcgtgggc
caggcccatgttcaacgcgccttggtcaatgcccttgatcagggccgtctgcaccatgct
tacctatttacgggtacccgcggggtgggcaaaaccaccttggcgcgtattcttgccaaa
tgtttgaattgcaccgccaatggccgtggtgatgaaggcattacctctactccctgtgga
cagtgcgatagctgtcaagcgattgatgaaggccgctttgttgatttaatagaggtcgat
gcggcgtcaagaaccaaagtagaagatacccgggagctgctggataatgttcagtacgca
ccgactcaagggcgttataaggtgtacctgattgatgaggtgcacatgctttccaccagc
agtttcaatgcgctgctgaaaacgctggaagagccgcctccccacgttaaatttctgctg
gcgaccaccgatccgcaaaagctaccgccgacggttctctcgcgctgcctccagtttacc
ctcaaacatatgccgccagagcgcgtggttgagcacctgacctatgtactgggtgaggag
cacgttgagtttgacgaaagtgcgttatggctattgggtaaagcagcggaaggttccatg
cgtgatgccatgagcctgaccgatcaagccattgcgtttggtcagggggcggtgcgccat
gcggatgtggccgccatgctgggcaccttggatcaccgccatattcttgggctggcagaa
gccctggccgatgtggatgtgcagcgcctgctgggcgaggtagcccaattagccgaacaa
ggccctgactttgccgcggtgctggatgagctttcgagcatgctacaccgactagcggtg
gcgcagatggtgccggacgccgtggataacagccacggtgatcgtgacgttatcctgcaa
ctggcgagccgctttaccgctgaggacattcagctctattaccaaattggtattcagggc
cgcggggacatggtgcatgcccctgatttgcgcagtgcgttagagatgacgctgctgcgc
atgctggcgtttcgccctcagggggtgccgaaaccgccgcgtaccccgctaccgctgcgc
cgcgagccttcagagacggcagcgactcaagcgtcagtggtggaggcggcttcaccagcg
ccgcagcccgcgccagaagctgataccccgtcagaagctccgccgcccgaatctcagtca
aagccgccagcagagccccatccgcaagcgtccgtgcctgctgccgaagagaaacctccg
ctgcaagagccacctccttggactctcgaaactgatacagcagcgtccgagattgatgct
ccccagcaagctgctgagccagcggcgatggctgagcctgagcgtgctaatgagccagag
ccaaccgtaacccctgaaccagccgctggggctgagactgtagagcccaccacggctgag
gcgccaacagctcaaccagaggctctttcagaagccagtccagaaactcagtcagaagcc
attcccgaaaccgttcctgaagccgttcctgaagccctgtcaggcaagctggacaatgct
aagtggctggagtgttttgactccctgggcttgggcggcttaacccgtaacttggcgggc
aactgcttggtcgagagcgacgacggcacgttgctgacgctgcgcttagatcccagtcaa
gaagcaatgcaggctgaggtacaccaaacgcgtattgagcgggcgctcaaggagcagggt
ataccccggcgaatagcgttttacgttgccgagttgtctaatagcctggaaacgccccgc
cagcgcgaagagcgccttaataaagagcgccatgcccaggcggttgatctactcaatcac
gacccacatgtacagaagttacagcaggcgtttggggcaaagctgatagaatccagcgta
aagcctgccgacgcgatacgctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (35)   

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