KEGG   Helianthus annuus (common sunflower): 110864234
Entry
110864234         CDS       T05101                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2 isoform X1
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110864234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110864234
   03032 DNA replication proteins [BR:han03032]
    110864234
Spliceosome [BR:han03041]
 Complex A
  U1 snRNP components
   Sm proteins
    110864234
  U2 snRNP components
    110864234
 Complex B
  U1 snRNP components
    110864234
  U4/U6.U5 tri-snRNP components
    110864234
 Complex C
  U2 snRNP components
    110864234
DNA replication proteins [BR:han03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     110864234
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 110864234
NCBI-ProteinID: XP_021968951
Position
6:538286..546990
AA seq 167 aa
MICKNMVWTLGIQFGWPVYYSTDPLLLLLLHHLSFPRLNERTNRSFCCQLSLLVYIHHEV
SRPMEEDAPTKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVL
ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq 504 nt   +upstreamnt  +downstreamnt
atgatatgtaaaaatatggtttggaccttggggattcaatttggttggcctgtctactat
tcgacagatcctctgctgctgctgctgctgcaccatctatctttcccgcgtctgaacgaa
cgaacgaacagatccttttgttgccaactgtctcttttagtttacatccatcatgaggtg
agtcgaccaatggaggaagatgcaccaacgaagaatgaggaagaggagttcaacacgggg
cctctctctgtcttaatgatgagtgtcaaaaacaatactcaggttcttattaactgcagg
aacaataaaaagctactaggacgtgttagggccttcgatcgacactgcaacatggtgctg
gaaaacgttagggagatgtggactgaggtgcccaagacaggaaagggcaagaagaaagct
cttcctgttaacaaagacagatttattagcaaaatgtttcttcgaggtgactcagttatc
attgtgcttagaaaccccaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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