KEGG   Helianthus annuus (common sunflower): 110864274
Entry
110864274         CDS       T05101                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03020  RNA polymerase
han03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110864274
  09124 Replication and repair
   03420 Nucleotide excision repair
    110864274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:han03021]
    110864274
   03400 DNA repair and recombination proteins [BR:han03400]
    110864274
Transcription machinery [BR:han03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110864274
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110864274
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 110864274
NCBI-ProteinID: XP_021969005
Position
1:36725297..36728923
AA seq 202 aa
MSDKGGKGGKSALKSPDGSAKLKGRKVQFDSEDMFDEKFETNGNGKSNGKDSGKGKGGKA
GPAKKEPPQVLLKVEEELPENAKCLMNCEAAQILQGIQDHMVLLSKDPTIKIPSSFDRAL
QYANTGNFYTDPQSVRQVLESLKKQDVSDGEICVIANTGIDTTEKAFALMPSLKAKQIKV
IEPLSAALTELTKLKESTIVLD
NT seq 609 nt   +upstreamnt  +downstreamnt
atgtcggataaaggaggaaaaggggggaaatctgcgttgaaatctccagatggttcagct
aagttgaagggaaggaaagttcagtttgattctgaagatatgtttgatgaaaagtttgag
acaaatggaaatgggaagtcaaatgggaaagattctggcaaggggaaaggtggaaaggca
ggacctgcaaagaaagaacctccacaagttttgctcaaggttgaagaagagcttcctgag
aatgccaagtgtttgatgaactgtgaagctgctcaaatcttgcaaggaatccaagatcac
atggtgctactgtccaaggaccccacaatcaaaatcccaagttcatttgacagggcattg
cagtacgccaacacgggcaatttctacaccgacccgcagtctgttagacaagtactggaa
tctcttaagaaacaagacgtttctgatggcgagatatgtgtcattgcaaatactggaatt
gacactactgagaaagcgtttgctctcatgccatcattaaaggccaagcaaatcaaggta
attgaaccgttgagtgctgcattaactgagctgacgaagctgaaggaaagcactatagtg
ctagattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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