KEGG   Helianthus annuus (common sunflower): 110868430
Entry
110868430         CDS       T05101                                 
Name
(RefSeq) replication factor C subunit 3 isoform X1
  KO
K10756  replication factor C subunit 3/5
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03030  DNA replication
han03410  Base excision repair
han03420  Nucleotide excision repair
han03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110868430
   03410 Base excision repair
    110868430
   03420 Nucleotide excision repair
    110868430
   03430 Mismatch repair
    110868430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:han03032]
    110868430
   03036 Chromosome and associated proteins [BR:han03036]
    110868430
   03400 DNA repair and recombination proteins [BR:han03400]
    110868430
DNA replication proteins [BR:han03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110868430
  DNA Replication Termination Factors
   ELG1-RFC complex
    110868430
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110868430
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110868430
  Check point factors
   HRAD17(Rad24)-RFC complex
    110868430
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Rad17 DNA_pol3_delta RuvB_N Mg_chelatase Sigma54_activ_2 AAA_5 AAA_22 DUF815 AAA_11 ABC_tran AAA_23 nSTAND3 AAA_24 T2SSE AAA_29 POC1 AAA_16 AAA_30 AAA_2 RsgA_GTPase Spore_III_AA AAA_33 RNA_pol_L FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 110868430
NCBI-ProteinID: XP_021973280
Position
7:123669382..123673368
AA seq 354 aa
MLWVDKYRPKTLDKVIIHEDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQIFG
ASAEKVKVENKNWKVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSR
CLNIRINAPKEDEIVKVVEFIGKKEGLQLPPGFAARIAEKSGRSLRRAILSFETCRVQQY
PFTNNQVIPPMDWEEYIFEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLYE
LLKKLDFELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgctgtgggtggacaaatacagaccgaaaaccctagacaaggttattatacacgaagat
gtcgctcagaatctcaagaaattggtcaccgagcaagattgcccacacttattgttctat
ggaccaccgggttccggcaagaaaaccctaattatggcgcttctcagacagatatttggg
gctagtgctgaaaaggtgaaagtggagaataagaactggaaagttgatgctggaagtaga
actattgatctggaactcacaactctatcaagcacacaccatgtggagctaaaccctagt
gatgcaggctttcaagaccggtacattgttcaagaaatcatcaaagagatggcgaaaaac
agaccgattgacaccaaaggaaaaaagggtttcaaagtattggtgctgaatgaggttgat
aaactttcaagagaagcgcaacattctttgagacgaacaatggagaaatacagtgcatcg
tgccgtttgatcctgtgctgtgacagctcatcaaaggttactgaagcagtgcggtctcgt
tgtcttaacatccgaattaacgcaccaaaagaagatgagattgtgaaggttgtggaattt
attggcaagaaggaagggttacaacttcctcccggatttgctgctcgaatagcggaaaaa
tcgggtcggagtttaaggagggcgatattgtcatttgaaacttgtcgtgtccaacagtac
ccttttacgaataatcaagtaatcccccccatggactgggaagaatatatatttgagata
gcatctgacattatgaaagaacaaagcccaaaacggttgttccaggttcgaggaaagttg
tatgagttacttgttaattgtatccctcctgaaattatattaaagaggctgctttatgaa
ttgctgaagaaactggattttgaattgaagcatgaggtctgtcattgggctgcatattat
gaacataggatgcgtcttggacagaaggctatttttcacattgaagcatttgtagccaag
ttcatgagcatttacaaaggcttcctgatagctacattcggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (26)   
   Pfam (26)   
All databases (46)   

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