KEGG   Helianthus annuus (common sunflower): 110869196
Entry
110869196         CDS       T05101                                 
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
han  Helianthus annuus (common sunflower)
Pathway
han04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110869196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:han04121]
    110869196
Enzymes [BR:han01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     110869196
Ubiquitin system [BR:han04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110869196
  Multi subunit Ring-finger type E3
   ERAD complex
    110869196
   LMBR1L-GP78-UBAC2 complex
    110869196
SSDB
Motif
Pfam: zf-RING_2 CUE zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-ANAPC11 zf-C3HC4_2 zf-C3HC4_3 zf-RING_11 zf-RING_5 zf-RING_16 E3_UbLigase_EDD zf-C3HC4_4 PHD RINGv zf-HC5HC2H Prok-RING_4
Other DBs
NCBI-GeneID: 110869196
NCBI-ProteinID: XP_021974184
Position
7:complement(147495346..147505501)
AA seq 583 aa
MKFSLYPMGVGYLAVSAVCTVLSFIGLRYWSELSYVKLKSDGLMGEDLLHPGVANRVLDL
LLGSYTTFALVVNFVLNVFMLVILSLKTLFFVELQAAESRKLVERLVNYVIYKGTFLPLV
IPPTIVQAGLWSTWLTVLCSLKMFQAIARDRLERLNASPSATPWTYFRVYSALLLVVTVD
AVWIRTCLLIYQRIPSSMFLLLFFEPLSVAFETLQAILVHGFQLLDIWLHHSAGSTANSK
ISKLLDTSTAGSLWEWKSVILRNLGFFLDIMTLLMAFGHYVYIWRLHGMTFHLVDAVLFL
NIRALLSAIAKRIRGFVKLRIALRTLHGALPDATSEEIQSYDDECAICREPMAKAKKLSC
NHLFHLSCLRSWLDQGLSDNYSCPTCRKPLFVGTPEGNSVPHSGDVSSDEQLARQLSSTL
DLQNTPTGVIPNQIQTPFERDDWRGSGSESGWLGFDGSDPSTRPAGLGRVQMMMRQLAAV
GETYAQTALEDSSWNLWPISPSQASTSTSSSNNPSTSGIRHRGHAGGSLATTTPRVSDDD
LSHLLAMAETVREVLPHVPDELILRDLQRTNSVSVSVNNLLQM
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgaagttttccttgtatcccatgggtgtgggctatttagccgtttcagcagtctgtacc
gtattgagctttatcggcctccgatactggtcagagctttcgtatgtgaaactaaagtct
gatggtttgatgggtgaagatcttcttcaccctggggttgccaatcgcgtactggattta
ttgttgggttcttataccacttttgcattggtggtcaattttgttctcaacgtttttatg
ctggtcatcttgtctcttaagacactattttttgttgagctgcaagcggctgaatctcgg
aaattggtggagcggttagttaattatgttatctacaagggaacatttcttccgttggta
atcccaccaacaatagttcaagcaggactgtggtcaacatggctgactgttttatgctct
ttaaagatgtttcaagcaatagccagggatcgccttgaacgtttgaacgcctctccttct
gcaactccttggacttattttcgtgtatattccgctttgttgctggttgtcactgtcgac
gcagtctggatacggacgtgcctactcatataccaaagaataccatcatctatgtttttg
ttattattctttgaaccacttagcgtagctttcgaaacacttcaggccattttggttcat
ggctttcaactgcttgatatatggctacatcactcagcaggcagcaccgcaaattccaaa
atatcaaagcttttggatacgtcaacagcaggttcattgtgggaatggaagagtgttatt
ttaaggaatcttggcttttttcttgatattatgactttgttaatggcttttggtcattat
gtgtatatttggcggcttcatggcatgacattccatcttgtagatgcagttcttttctta
aatatacgtgccttgttaagtgcaatcgcaaagcgtataagagggtttgtaaagttaagg
atagctttgagaactcttcacggggctctccccgatgcaacatccgaagagatacaatct
tatgatgatgaatgtgcaatttgccgggaaccaatggccaaggctaagaagctctcgtgc
aatcatcttttccatctttcgtgtctgagatcttggttagaccaaggtttaagtgacaac
tattcctgccccacgtgtcgaaaaccgctctttgtgggcacacccgaaggaaattctgtg
cctcattctggcgatgtttcaagtgacgaacaacttgcccgccagttaagctctacactt
gatctacaaaatactcctactggtgtaatcccaaatcaaattcagaccccttttgaacgt
gacgattggagggggtcaggatcagaatcgggttggctggggtttgatgggtcggatcca
tctacaagacccgcgggtctgggaagagttcagatgatgatgaggcaacttgcagctgtt
ggtgaaacttatgcccaaactgcccttgaagattcttcatggaatctgtggcctataagt
ccatctcaggctagcacatctacttcaagttcaaacaacccttctaccagtggtataaga
catcgagggcatgctggtggttcactcgctacgactaccccgcgtgtttcagatgatgac
ttgtcacatttacttgcaatggcggaaacagttcgtgaagtgcttccacatgtaccagat
gagttaatattgcgggatttgcagcgaacaaattcagtatctgttagtgtgaataatctt
cttcaaatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (17)   
   Pfam (17)   
All databases (57)   

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