KEGG   Helianthus annuus (common sunflower): 110878332
Entry
110878332         CDS       T05101                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
  KO
K13192  RNA-binding protein 26
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:han01009]
    110878332
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110878332
   03041 Spliceosome [BR:han03041]
    110878332
Protein phosphatases and associated proteins [BR:han01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110878332
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     110878332
Spliceosome [BR:han03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    110878332
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 zf_CCCH_4 RRM_3 PHM7_cyt Nup35_RRM Stk19 HrpB7 DUF4407 zf-CCCH
Other DBs
NCBI-GeneID: 110878332
NCBI-ProteinID: XP_021982310
Position
9:118504426..118510061
AA seq 805 aa
MELRVSSRRPRMIYKGDPDDKEISDDDDDRNHKHRRRDDARSRLLEDEVTGHIFTKSYRK
GSKSFQNRHLGGETGSQSNETWKKYSFNPIEKEISVKFNQKGPGLTQFSRGRDSGQWGLA
TVSNSQGQSWSPFGLVPGISNGDQDMFHPLGLQGTYRPAINSSLNTGLARRQCRDFEEQG
FCLRGDMCPMEHGTNRIVVEDVQSLSQFNLPISLASANLSIAPVGTGPTPSTSVVMNTRS
NSKGPHGKNIKHNIGDIDSAADFYDPDQPLWSNDSHTSTGLQSIPQPNVGKNDSLLDHGL
SGDHRIGQSDGSDNELVTNSGAVRASQKTRSSVHGRITSITKRTEMGENVISASNSSFRK
PNISESSLKSQSGNGRMNRKPSQKAQRTLFVNGIPRQNNKRELLLSHFQKFGEVTNVSIP
LNSERAFVQFSKREEAEAALMAPDAVMSNRFIKLFWANRDIIHDVQTVSGRNMSIPPLGL
KVSSVANKRKDDFQSVSHDSRVSHASASDHSKPTVVYDTKITPPLQKKLESLELLKEELR
KKQEMLDQKRNDFRRKLDKLEKQSTGPEGEVAPEQVAKKQKLGVLADSVTAATLSDGDRD
AVVPSAQDEVAGTSSSKSADPSRKQCSKTKLSLALPESSSLKSSPLSSSNLGSPVVSNRF
KLDNRPTAFKIVSPLPDGLADVPVLKKHFSPYGDLSKVQVEDDPKTSNVTAQIYFRTRHA
AEKAFVGGKSWKGHNLQFVWLNSTTNSRKDDVVRQTPSHFLKDSSKTTSQQPYTSGDGDS
EKTQGAEIVKDDIETRHSNCISDTE
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggagcttagagtttcatcccgaaggccacgcatgatatacaaaggtgatcccgatgat
aaagaaatcagtgatgacgatgatgatcgcaaccataagcatcgtagaagagatgatgcg
aggtctcggttattggaggatgaagttacgggacacatctttacaaagtcatatagaaaa
ggaagtaaatctttccaaaatagacatcttggcggcgaaactggttctcagtccaatgaa
acatggaaaaagtatagttttaatcctatcgagaaagagatctctgtaaagtttaaccag
aaaggacctgggttaactcagttttctagaggaagggattccggtcaatggggtttggca
acggtttcaaattctcaaggtcaatcctggagtccatttggattggttcccggaatttca
aacggtgatcaggatatgtttcaccctcttggcttacaaggaacatacagaccagctatt
aattcttctttgaacacgggacttgcaagacgacagtgtcgggactttgaggaacaaggg
ttttgcctaagaggtgacatgtgtcctatggagcatgggacgaatcgtattgttgtagaa
gatgttcagagcctttcacagtttaatctccctatatcacttgctagtgcgaatctatct
atagcaccagtggggacaggacctacaccctcaactagtgtcgtgatgaacacgcgatca
aacagcaaaggcccgcatggaaaaaatatcaagcataatatcggtgacattgattctgct
gctgacttttatgatcctgatcagcctctttggagcaatgattcacatacatcaaccggg
cttcaatctatacctcagccaaatgttggaaaaaacgattcattactggatcatggttta
tctggtgatcatcgcattggtcagtccgacggatctgataatgaacttgtaaccaatagt
ggggctgtgcgcgcatctcaaaaaacaagatcttctgtacatggtagaataaccagcatt
acaaaaagaacagaaatgggagagaatgtaatttccgctagcaattcaagtttccggaag
ccgaacatttcagagtcatctttgaaatctcagagtggaaatggacgtatgaaccgtaag
ccgtcacaaaaggcacaacgtacgttatttgttaatggcattccccgtcagaataacaaa
agggagctcttactttcacattttcaaaagtttggggaggttaccaatgtttctattcct
ttaaatagcgagcgggcttttgttcagttctctaaaagagaagaagcagaagctgctctt
atggcacctgacgctgtaatgagtaatcgctttattaagctattttgggctaatcgtgac
atcatacacgatgtccagacagttagtggccgtaacatgtctataccaccccttggattg
aaagtttcttctgttgcaaacaaaagaaaagatgatttccaatcagtatcgcatgatagc
agagtctctcatgcctctgcttctgatcactcaaagcctacggttgtatatgacacaaaa
ataactccacctttgcaaaagaagctcgagagtctggagcttttgaaggaagaacttcgg
aaaaaacaagaaatgcttgatcagaaaaggaatgacttccgacgcaaactggataaactt
gagaaacagtctactggtccagaaggtgaagtagcacccgaacaggttgctaaaaagcag
aagttgggggttttagctgattctgtaacggctgcaaccctgagtgacggggatcgtgat
gctgttgtaccatcagcacaagatgaagtggcaggtactagtagtagcaaatctgcggat
ccctccaggaagcaatgttcgaaaacaaaattatcattagcacttccagaatcttcaagc
ttgaaatcatctccactttcatcgtccaatcttggatcacctgttgtcagcaatcggttc
aaactggacaatcggccaactgcgtttaaaattgtttcacctctacccgatggtcttgct
gatgttcccgtgttgaagaaacacttttcaccatatggcgatctttcaaaggtgcaagta
gaagacgaccccaaaacatccaatgttacagctcagatatatttcagaacacgtcatgcg
gctgagaaggcgtttgtgggtggcaaatcctggaaagggcacaatttgcaatttgtatgg
ctaaattctactaccaattccaggaaagatgatgttgttaggcaaactccgtcacatttt
ttgaaagattcttctaaaactacttcccaacaaccatacacatctggagatggagattct
gaaaaaactcaaggagcagaaattgtcaaggatgatatagaaactcgtcattctaattgc
attagtgacaccgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (35)   

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