KEGG   Helianthus annuus (common sunflower): 110904070
Entry
110904070         CDS       T05101                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
  KO
K13192  RNA-binding protein 26
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:han01009]
    110904070
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110904070
   03041 Spliceosome [BR:han03041]
    110904070
Protein phosphatases and associated proteins [BR:han01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110904070
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     110904070
Spliceosome [BR:han03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    110904070
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 zf_CCCH_4 Nup35_RRM zf-CCCH
Other DBs
NCBI-GeneID: 110904070
NCBI-ProteinID: XP_022005566
Position
14:complement(142731321..142739735)
AA seq 815 aa
MELKASDQEPAHLPSISESNPDEKEISDDDDDDRNHKHRRRDDARSQSQEREAAEQVYAK
PYKRGNRSFENGHIYKESGSQSSEPWKNNRRHSDLNQRIRGDFGSIRGRGVWNQHDIASQ
MGPGPGMFGGRGLPTVSNAYGPSWGAFAMVPGLPNGGLDPLHPLGLQGAYRSLNPSMNMG
MGLPRQRCRDFEEQGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLQNANTSAVPPV
PLPASGTSTNSFKPSHGKTGKRGVGSSGSGLNEAFIGSADGIGSDFYDPDQPLWGNNSQT
APALQSTSQSNIKESGSLLDPIPSADHRVGPLDDSDEHVVKSDRTATGRVNINSTKGKTE
MRGNMVSKASSLIEKQGALNNKQDNANSSLKMQSGNEKIVRKPSQKAQCTLFVNGVPLQQ
NRRETLISHFHKFGEVIDIRIPLNSERAFVQFSKREEAEAALTAPDAVMGNRFIKLFWAN
RDNIPVNGTISGYNIPPVPPRGTPVSSSHNDIIAPASDHPKPVVAKTPKPPPPSQKKLEN
LEVLKEELRKKQEMLDQKRNDFRRKLDKLAKQATASKGDVEPEQVAKKQKVGIVADSVKA
ETILSSPGAEVIGNGKKSMESAVPQRSKSTAVVVVQEAPALKPSLRPLPHVGPSVATNRF
KLDNRPTAFKIISSLPVDLANVAVLKEHFSQFGDLSKVELDDLEPADSKNDSGNVKYSAY
VYFTTRQSAEKAFSNGKCLNGHNLQFSWLKSSNHGKNGETPSTPKGNSDASVEPVVEIPK
TDSQKSGDEEAEKLEQKDVEKELVLMETDESNNAS
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggagcttaaagcttcagatcaagaaccagctcacttaccttccatatctgaaagcaat
cccgatgagaaagaaatcagtgatgatgacgatgacgatcgcaaccataaacaccgtaga
agagacgatgcaagatctcaatcacaagaaagagaagctgctgaacaagtatatgctaaa
ccatataaacggggaaacagatctttcgaaaacggccatatttacaaggaatctggctct
cagtccagtgaaccatggaaaaacaacagaagacattcggatttgaaccaaaggattagg
ggggactttggttcaatcaggggtagaggtgtttggaaccaacatgatattgcttctcag
atgggtcccggtcctggtatgtttggtgggcgcggtttaccaactgtttcgaatgcgtat
ggtccatcctggggtgcgtttgcgatggttccagggttaccaaatggtggtctggacccg
ttacatcctcttggtttacaaggagcttatagatctcttaatccttctatgaatatgggt
atgggacttccacgtcagcgatgtagagattttgaggaacaaggtttttgtcttagaggt
gacatgtgtccgatggagcatggtgttaaccgtattgttgttgaagatgttcagagcctt
tcacagtttaatctcccggtatcacttcaaaatgcaaatacgtccgcagtaccaccggta
cctttacctgcttctggtacctcaacgaattcattcaaaccatcacatggaaaaactggc
aaacgtggagtgggttctagtgggtcaggtttaaatgaagcattcattggttcagctgac
ggtatcggttctgacttttatgatcctgaccagcctctatggggcaataattctcaaaca
gcacctgcattgcaatcgacaagtcagtctaacataaaggaaagtgggtctttgttggat
ccgatcccatctgcagatcatcgtgttggcccacttgatgactctgatgaacatgtggtc
aaaagtgatcggaccgcaacaggaagagttaacattaacagtacaaaaggcaaaaccgaa
atgcgaggaaatatggtttctaaagcaagttctttaattgaaaaacagggggcattaaat
aataaacaagacaatgcaaactcatctctgaaaatgcaaagtggaaatgaaaaaattgtg
cgtaagccatctcaaaaggcacaatgtacgttatttgtgaacggtgttccactacaacag
aaccgaagggaaaccctaatttcacattttcacaagtttggtgaagtgattgatatccgt
attcctttaaatagtgaacgagcttttgttcagttttccaaaagagaagaagcagaagct
gctttaacggcacctgatgctgtgatgggtaatcgctttattaaactattttgggctaat
cgtgataacattccagttaacggaacaatcagtggctataacataccacctgtgccacca
cgtggcacgccagtttcatcttcacataatgacataattgcccctgcttctgatcaccca
aagcccgtggttgccaaaactccaaaaccacctccaccttcacaaaagaagcttgagaat
ttagaggttttgaaggaagagcttcgcaaaaaacaagaaatgcttgatcagaagagaaat
gactttcgccgcaagttagacaaacttgcgaaacaggctacagcttcaaaaggagacgta
gaacctgaacaggtggcgaaaaaacagaaagtaggaattgtagctgattctgtaaaagct
gaaaccattttatcttcaccgggagctgaagtgataggtaatggtaaaaaatctatggaa
tctgctgtgccacaaagatccaaatcgacggctgtggttgtagtacaagaagcaccagcg
ttgaaaccatcactacgcccattgccacatgttggtccgtcagttgctaccaatcggttc
aaactcgacaatcgtcccactgcatttaagataatttcatctctgccagttgatcttgcc
aatgttgcagttttgaaggaacacttttcacagttcggtgatctttctaaggtggaatta
gatgatctagagcctgccgatagcaaaaatgactctggaaacgttaaatattcagcttat
gtatacttcacaacccgacaatcagctgaaaaggcattttcaaatggtaaatgtttgaat
ggtcacaacttacagttttcatggttaaaatctagtaaccatggtaaaaatggtgaaact
ccatctactcctaaaggaaattcagatgcttctgttgagcctgtggttgaaatcccgaaa
accgattctcagaaatctggagatgaagaagctgaaaagcttgaacagaaggacgttgaa
aaagaattagtattgatggaaacagatgaaagtaacaacgcgagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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