KEGG   Helianthus annuus (common sunflower): 110908737
Entry
110908737         CDS       T05101                                 
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110908737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110908737
Enzymes [BR:han01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     110908737
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     110908737
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Nrap_D2
Other DBs
NCBI-GeneID: 110908737
NCBI-ProteinID: XP_022009404
Position
2:complement(7393234..7405731)
AA seq 617 aa
MVGSEALPSPRQHGVTKPLSLAGPSEADLLRTKKLNKFLVDSGLYESQEETAKREKVLGQ
IKQIVVEWVKELTRLRGYSDQMVEDANAVVFTFGSYRLGVHGPGADIDTLCVGPSYVNRD
EDFFFGLHEMLTKKEEVTELQPVPSAHVPVMKFKFEGISIDLLYASISRSVVPDDLDISD
VSVLYNVDEPTVRSLNGCRVADQILKHVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGG
VNWAILVARVCQFYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIQEDELGCTVWDPRKNP
KDKTHHMPIITPAYPCMNSSYNVSISTLRVMTEQFQFGNRICEEIELNKAQWPVLFEPYM
FFESYKNYLQVDIVAADPDDLRAWKGWVESRLRQLTLMIERDTQGKLQCHPYPHDYIDPS
KQCSHNAFFMGLQRKQGELVQENQQFDIRGTVDEFRHSVNMYMFWKPGMEIYVSHVRRKQ
IPLYVFPDGYKRPRLPRAASHQPVCGLGSAEKTSVKRKGEGVERDSPQRRQSISPSPISS
PFMSPLSHSLVNGLEPVSSFKNEEVGVIGCSSGSSIVTNEDVGLEKTSFGSNCQELSEED
SQSAVDKLSRCLKLSQC
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggtgggttcggaggctttaccatcacccaggcagcacggagttacgaaaccgttgtct
ctagcagggccttctgaggccgatttgcttagaactaagaagttgaataagtttttggta
gattctggactttatgaaagtcaagaagaaacggctaagagggagaaagttcttggtcaa
attaagcagattgtagttgagtgggtgaaggaacttactcgccttcgtgggtactcggat
caaatggtcgaggatgcaaatgcagtcgtatttacttttggttcttatcggcttggggtt
catggtcccggggcagacattgacaccttgtgtgtcgggccatcttacgtcaatcgagat
gaagatttcttctttggcttgcatgagatgttgacgaaaaaggaggaagttactgaactt
caaccagttccaagtgctcatgttccagttatgaagtttaagtttgaagggatatctatt
gatcttctttatgctagcatttctcgttcagtcgtccctgatgatttggacatatcggat
gtttccgtgctgtataatgttgatgagccgacggttcgtagtcttaacggctgcagggtt
gctgaccaaattcttaaacatgttccaaatgttgagcattttcgtacgacacttcgttgc
ttaaagttctgggctaaaaggcgcggtgtgtattcaaatgtgactggttttcttggtggc
gtgaactgggcgatactagttgcacgggtatgtcaattttatccaaatgctgttccgagt
atgttggtttctcggttttttagggtatatacacagtggcgatggccaaatccggtgatg
ctttgtgctatacaagaggatgagcttggatgtactgtgtgggacccgcgtaagaatcca
aaggacaaaactcatcatatgccaatcataacacctgcctacccgtgcatgaattccagt
tataatgtctccataagcacacttcgtgttatgacagagcaatttcaattcggtaatcgg
atatgtgaggaaatagaacttaataaagcacagtggcctgtactttttgaaccgtacatg
ttcttcgagagctacaaaaactatttacaagttgacatagttgctgctgacccagatgat
ttacgggcttggaaaggttgggtagagtctcgtttgaggcagttgaccttgatgattgaa
cgagacacgcaagggaagcttcaatgccatccgtaccctcacgactacatcgacccgtca
aaacaatgttcacacaacgcgttttttatgggactacaacgaaaacaaggcgaattagtt
caagaaaatcaacaattcgacatccgtggtacagtcgacgagtttcggcattcggttaac
atgtacatgttttggaagcctgggatggagatttacgtttctcacgttcgtagaaagcaa
atcccactatatgtgtttccagatggttataaacggcctcgacttccgcgggccgcgagt
catcaacccgtttgcggtttgggttccgctgagaaaacgagtgtaaagagaaagggagaa
ggtgtggagagagatagtccacaaagaaggcaatcaattagcccgagcccgatctcgagc
cccttcatgagtccgctgagccattcgttagttaacgggctcgaacccgtgagtagtttt
aagaatgaggaagttggggttattggatgtagttcggggtctagtatagttacgaatgag
gatgtcgggcttgaaaaaacgagtttcggaagcaactgtcaggagttaagtgaggaagat
tctcaatcggctgtagataaattatcgaggtgtttgaaattgagccaatgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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