KEGG   Helianthus annuus (common sunflower): 110909268
Entry
110909268         CDS       T05101                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03013  Nucleocytoplasmic transport
han03015  mRNA surveillance pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110909268
  09122 Translation
   03013 Nucleocytoplasmic transport
    110909268
   03015 mRNA surveillance pathway
    110909268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110909268
   03041 Spliceosome [BR:han03041]
    110909268
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110909268
    TREX complex
     110909268
Spliceosome [BR:han03041]
 Complex C
  Other components
   EJC/TREX
    110909268
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110909268
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 110909268
NCBI-ProteinID: XP_022009993
Position
14:123262469..123265755
AA seq 278 aa
MASLDMSLDDMIKSRRTAVRGRGRGRGGARGGRGQQRSFGGGRPTGPPRRGPLGVSARPS
AHTIAKSFRKPKSSPWQRNLLEESLTAAGVPGFDNVAKLNVSNLDIGVTNEDIRELFSEI
GELKRYAIHYDKYGRPSGSAEVLFARRSDAFQALKRYNNVQLDGKPMKIEIEGSNTKTPV
SARVNVVGGLNGQRTVVMTSRMGRGRGAIAANRAFGNRGGVRNGRGGMTNMRGGIGGGRG
RGRGQSGGRGRGRGKKPAVDKSADELDKELENYHAMQS
NT seq 837 nt   +upstreamnt  +downstreamnt
atggcatctttagatatgtcacttgatgatatgattaagagtaggcgtactgctgttaga
ggtagaggtagaggtcgaggtggggctcgtggtggccgaggtcaacaaaggtcatttggt
ggtggaagaccgacagggccacctcgcagaggtccccttggtgtcagtgctcgaccatca
gctcataccattgccaagtctttccgcaaaccgaagagttccccttggcagcgcaacttg
cttgaagagagtttaaccgcagcaggcgttccagggtttgataacgttgcaaagttgaac
gtttccaacttggacatcggagtgacaaatgaagatattagggaacttttctctgagatt
ggggagctgaaaagatatgcgattcattatgacaaatacggccgtccaagtggttcagct
gaagtcttgtttgctagaagaagtgatgctttccaggcactaaagcggtataacaatgta
caattggatgggaaacctatgaagattgaaattgaaggctccaacactaagactcctgtt
tctgctcgtgttaatgttgttggaggtctaaatggtcagagaactgttgtgatgacgtca
agaatgggtcggggtagaggagcaattgcagctaatcgtgcatttggaaaccgtggaggt
gtaaggaacggacgtgggggtatgacaaacatgcgtggcggcattggtgggggtcgtggg
cgtggtcgaggtcaaagtggtgggcggggtcgtggtcgagggaagaaaccagctgtggac
aagtctgctgatgaactcgataaggaactagagaactaccatgctatgcagagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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