KEGG   Helianthus annuus (common sunflower): 110910281
Entry
110910281         CDS       T05101                                 
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110910281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:han03400]
    110910281
Enzymes [BR:han01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     110910281
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     110910281
DNA repair and recombination proteins [BR:han03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     110910281
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco Fpg-like_C
Other DBs
NCBI-GeneID: 110910281
NCBI-ProteinID: XP_022010669
Position
2:complement(10303530..10314712)
AA seq 509 aa
MADDLRIFLPLLLPDTSDSSSSDSSLDFFKDLIEQAKAAELLEEFEHSNEQSRRVRINRN
NDLLKREREPELPEVEASRRAIAENCIGKKIIRSVVADDDDAYVIDGVSRSDFEASLTGK
TIVGAHRKGKIMWIELDSPPFPLFQFGSAGAIYIKGIDGKKYKRSAVRDTDEWPFECSKL
FIELDDGLELSFIDKRRSAKVRLLENPATVAPISELGPDAFLEPMTQDELFEALSKKKVA
IKTLLLDQSFISGIGDWIADEVLYQAKIHPLQAAASIPKEVCAALHMSLKEVIEHSVEVD
AVSSHFPVDWLIHYRWCKKPGKINGMAIEFINVGGRTTAYVPELQKLSGDQAVKVAVKPV
HLLGEESFGPSQKRKSSDSGIYRADTPNVEVSSGFVIPDINEDPSPRRQKRREKKDKGPS
SRNEYPRDITGRFEEYMAMKKELMDIKRIREEKYLTLADEQREALRQIMYDNDFETFNRP
TDNVHPSMLEITLARKREIAKKYGWPCNF
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggctgatgatcttcgtatatttttaccacttttactgcccgacacttctgattcttcg
tcaagcgacagtagcttggattttttcaaagatctcattgagcaagccaaagcagcagaa
cttctagaagagttcgaacattctaacgaacaatctagaagagttcgaattaaccgcaac
aacgatcttctaaagagagagcgtgaaccggagcttccagaagtagaagcttctagaaga
gccattgcagagaactgtatcggaaagaagattatacgatctgttgttgccgacgacgac
gatgcttacgtcatcgacggtgtttcacgttccgattttgaagcatctctcaccggaaaa
acaatcgtcggagctcatcgtaaggggaagattatgtggattgagcttgattctcctcct
tttccgttgtttcagtttggatcggcgggtgctatatatatcaaaggtattgatggaaag
aagtataaaaggtctgcggttcgagatacagatgaatggcctttcgaatgttccaagtta
tttatagaactagacgatggtttggagctatcgtttattgacaaaaggcgatctgcaaaa
gtccgcttacttgaaaatccggctactgtggccccgatatctgaacttggtccagatgcc
tttttggagccaatgacacaagatgaactctttgaagcactgagcaagaagaaggttgcc
ataaagactctcttactcgatcagagctttatttcaggtatcggtgattggattgcagat
gaagttctatatcaggcaaaaatccatccacttcaggctgctgcgagcattcctaaagaa
gtatgtgcagcactgcatatgtcccttaaagaggttattgagcattcagttgaagttgat
gcggtcagcagtcattttccggttgattggttaattcattatagatggtgcaaaaaacct
ggaaaaataaacggaatggcaatcgagtttatcaatgttggaggcaggacaactgcgtac
gtacccgagttacaaaagctaagtggagaccaagcagtcaaagtggcagtcaaaccggta
cacttgttgggtgaagaaagcttcggcccgagtcaaaaaagaaagtcttcggattcggga
atttatagagcggatacaccgaatgtagaagtctcgagcggattcgttattcccgacata
aacgaggatccctcgccaagacgacaaaagagaagggagaaaaaggacaaagggccgtct
tcaagaaacgaatatccaagagatataaccggtagattcgaagaatacatggccatgaaa
aaagagttaatggatattaaacgtatacgagaagaaaaatacttgaccttggcggatgag
caacgagaggcgttgcgacaaataatgtacgacaatgactttgagacatttaatcggcct
accgacaatgttcacccttcgatgttggaaatcacactcgctagaaaacgtgagatcgca
aaaaaatatggatggccttgtaatttttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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