KEGG   Helianthus annuus (common sunflower): 110927298
Entry
110927298         CDS       T05101                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110927298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110927298
   03036 Chromosome and associated proteins [BR:han03036]
    110927298
Spliceosome [BR:han03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110927298
 Complex B
    110927298
 Complex C
   U2 SnRNP specific factors
    110927298
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110927298
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Maestro_HEAT Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 110927298
NCBI-ProteinID: XP_022026654
Position
2:complement(173447092..173452514)
AA seq 1267 aa
MDPVDLEIAKTQEERKIMEAALAPNSITFDTELYDGNNRFQDYNREIPTNDDEDNTDAMD
NEVARKLASYTAPKSLLNDMPRGGDDESLGFKKSQRIIDREDDYRRRRLNQVISPERHDA
FASGDKTPKPETRTYADVMREAALKREKEETLKVIARKKKEEEENKAAGKDKESVAAPPA
QKRRNRWDQSQDDSGAKKAKTGSDWDMPDSTPGIGRWDATPTPGRIGDATPSMSRKNRWD
ETPTPGRLADSDATPGGGGVTPGATPAGMTWDATPKLSGLATPTPKRQRSRWDETPATMG
SATPGGATPAAGYTPGVTPVGGVELATPTPGAINLRGAITPEQYNLMRWEKDIEDRNRPL
TDEELDAMFPQEGYKILEPPASYIPIRTPARKLLATPTPLGTPLYAIPEENRGQQFDVPK
EMPGGLPFMKPEDYQYFGALLNEEDEEDLSPDEQKERKIMKLLLKVKNGTPPQRKTALRQ
LTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVI
EPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASA
LGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDEN
QKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMD
AIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPEFFRNF
WVRRMALDRRNYKQLVETTVEIANKVGVPDIVARIVEDLKDESEPYRRMVMETIEKVVAN
LGASDIDSRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIK
WRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGAL
KAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMR
ICFELLEMLKAHKKGIRRAAVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIA
IVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDAL
MDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEGM
RVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPMLEDEGDNIYSR
PELTMFV
NT seq 3804 nt   +upstreamnt  +downstreamnt
atggatccagtggatttggagatcgcaaagacacaagaagaaaggaagataatggaggca
gcactagcaccaaactccattactttcgatactgagctttacgatggaaacaatcggttt
caggattacaacagggagattccgactaacgatgacgaagacaacactgatgctatggat
aacgaggttgcaaggaagttagcctcttacactgctccgaaatcactcttgaatgatatg
cccaggggcggtgatgatgagtcgttagggtttaagaagtcgcaaaggattatcgataga
gaagatgattacaggaggagacggttgaatcaggttatttctccggaacgacatgatgct
tttgctagcggtgataaaacccccaaacctgaaacacgaacgtatgctgatgtcatgcgg
gaagccgcgttgaaaagagagaaagaggagacattgaaagtgattgcgagaaagaagaag
gaagaagaggagaataaggcggcggggaaagataaggaatcggttgctgcaccgccagct
caaaaacggaggaaccgatgggatcaatcgcaagacgattctggtgcgaagaaagcgaaa
acgggttccgattgggatatgccggattcaactccgggaatcggaagatgggatgcgacc
ccgaccccggggagaatcggtgatgcgaccccttcaatgtctaggaaaaaccgatgggat
gaaactccgacacctggtcggttagctgactcagacgctacgccaggtggcggtggagtg
acacctggcgctactccggcaggtatgacatgggacgcgacgccaaaactgtctggtctt
gctaccccgacaccgaaacgacagaggtcaaggtgggacgagacaccagccaccatggga
agtgcgacgcctggcggtgcgacacccgcagccggttatacacctggcgtgacacctgtt
ggtggggtcgaactagccacaccgacaccaggtgcgataaatctccgtggtgcgatcaca
ccagaacaatataatctaatgagatgggagaaagatatcgaagatagaaaccgcccatta
accgatgaagaacttgatgcgatgtttccacaagaagggtacaagatactggaaccacct
gcgtcttatattccaattagaactcccgcacgaaagcttcttgctacaccgactccgttg
ggaacaccgttatacgccattcctgaagaaaacaggggtcaacagtttgatgtcccgaaa
gagatgccaggtggacttccgttcatgaagccggaagattaccagtacttcggtgcgttg
ttgaatgaagaagacgaagaagatttatctccagatgaacaaaaagagagaaagatcatg
aaactgttgcttaaagtcaagaacgggaccccaccacagaggaaaacagcattgagacag
ttaaccgataaagcccgtgaatttggtgcgggcccgttattcaaccgtattcttccgtta
cttatgcagcctacgttagaagaccaagagagacacttgctggttaaagttatagacaga
gttctttacaagctggatgagcttgttcgaccttacgttcataaaattctcgttgtgata
gaaccattattgatcgacgaagattactacgcccgtgttgaaggtagagaaatcatatcg
aatctcagtaaagcagctgggttagcaactatgatagctgctatgcgtcctgatatcgat
aacatcgacgaatacgtccgaaacacaaccgcaagagcttttagcgttgtcgcatcagca
ctcggaatccctgctttgttaccgttcctgaaagctgtttgtcaaagtaagaagtcatgg
caagctagacacacaggtattaaaatcgttcaacaaatcgctattttaatcgggtgtgcg
gttcttccccatttacgttctctcgtcgagattatcgaacacgggctcaacgacgagaat
caaaaggttagaacgattaccgcgctgtcgcttgccgcacttgctgaagcggctgcaccg
tacggtatcgaaagttttgattcagttcttaagccgttgtggaaaggtatccggtcccac
cgtgggaaggttttggctgcgtttttgaaagcgattggttttattattccgttaatggat
gccatttatgctagttactatacgaaagaagttatggttattttgattcgtgagtttcaa
tctcctgatgaagaaatgaagaaaatcgtgttgaaagtggtgaaacagtgtgtgagtact
gaaggtgttgaagcggattacattcgaagtgatattcttccagaatttttccgaaacttt
tgggttagacgaatggcgttggatcgaagaaactataagcaacttgttgaaacaacggtt
gagatcgcaaataaagtcggtgttcccgatattgtagcgagaatagttgaagatctgaaa
gatgaaagcgaaccttacagaagaatggtgatggaaacaattgaaaaggttgtagcaaat
ttaggtgcgtcagatatcgattcccgtttagaagagcttttaatcgatggtattctgtac
gcgtttcaagaacaaactagcgatgatgcaaacgtcatgcttaacgggttcggtgcggtg
gtcaactctcttggtcaaagggtgaaaccataccttcctcaaatttgtggtacgattaaa
tggcgtttaaacaacaaaagtgcgaaagtgcgacaacaagctgcagatctgatttcgaga
attgcggtggttatgaaacaatgtcaagaagaacaactcatgggacatctcggtgtcgtt
ttgtacgaatatttaggtgaagaatatcccgaggttttgggttcgattttgggtgcgttg
aaagcaatcgtgaatgttatcggtatgacgaaaatgactccaccaatcaaagacttgctt
ccacgtttaactccgattttgaaaaatcgtcacgaaaaggtgcaagaaaactgcattgac
ttagtgggccgtattgctgaccgtggtgcggagtttgtccctgctcgtgagtggatgcga
atctgtttcgagctgcttgaaatgctaaaagcccataaaaaaggaatccgtcgagctgcc
gtgaacacgtttggttacatcgcgaaagccatcggaccacaagacgtcttggccaccctt
ctaaacaaccttaaagtccaagaaagacaaaaccgtgtctgcacaaccgttgctatcgca
atcgttgcagaaacatgctcgccgtttacggttttacccgcgttgatgaacgagtatcgt
gtacccgagctaaacgtgcaaaacggtgttttgaaatcgttatcgtttctcttcgagtac
atcggtgaaatgggtaaagattatatctacgctgttactccgttacttgaagacgcactt
atggaccgggacctggttcaccgacagaccgcagcgtcagcggttaagcacatggctctg
ggtgtggcgggcttgggctgtgaagacgcgttgatccacttactgaactacgtctggccc
aacatctttgaaacgtcaccgcatgttataaacgctgtgatggaagcgatcgaggggatg
cgtgtggcgctcggtgcggccgtggtgcttaactactgtttgcagggtttgtttcatccc
gcacggaaggttcgagaagtttattggaagatttataactcgctttatattggtgctcaa
gatgcgcttgtggcagcttatcctatgctcgaggatgaaggggataatatctacagtcgg
ccggagttgaccatgtttgtctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (122)   
   KEGG ORTHOLOGY (1)   
   RefGene (118)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (140)   

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