KEGG   Helianthus annuus (common sunflower): 110935670
Entry
110935670         CDS       T05101                                 
Name
(RefSeq) periodic tryptophan protein 2-like
  KO
K14558  periodic tryptophan protein 2
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110935670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:han03009]
    110935670
Ribosome biogenesis [BR:han03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    110935670
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Utp12 NBCH_WD40 RMC1_N WD40_like BBS2_Mid Nup160 Utp21 WDR54
Other DBs
NCBI-GeneID: 110935670
NCBI-ProteinID: XP_022033733
Position
4:6554140..6560948
AA seq 880 aa
MNYRFQNLLGAPYRGGNAVVSNNTLLISPIGNRISVTDLLKSETLTLPFQSSSNISRIAA
SPDGVFLIAVDDNGRCQFINLRRRAVLHRMQFKKPVSCIKFSPNGEFIAVGAGKLVEIWR
SPGFRKEFFPFELVRTFANCNNKVTCVDWSPDSKYLLAGSKDLTVRLFSLKKVRGEVSSK
SKPFMFLGHREAIVGAFFGVDKKTNAVDKVYTLSRDGAIFGWRYVDEKLDEPESPGTPER
MEVDGISDVKKRKNVDVDDERNGGFELHKGKWELVKKDFFMQAPAKLTACDYHKGLELVV
VGFSSGVFGLYQMPDFVCIHLLSVSREKITTASFNELGNWLTFGCAKLGQLLVWEWKSES
YILKQQGHYFDVNTIAYSPDSQLLATGADDNKIKVWNVSSGFCFVTFSEHTNAVTALHFM
ASNHCLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIF
VWSMKTGRLLDVLSGHEGPVHGLMFSPTNAILASSSWDRTVRLWDVFDGKGSVETFPHTH
DVLTVVYRPDGKQLACSTLDGQIHFWDPIDGLLMYTIEGRRDIAGGRLMTDRRTAANSTS
GKCFTTLSYSADGNYILAGGSSRYICMYDVADQVLLRKFQITLNLSLDGVLDVLNSKNMT
DAGPLNLIDDDNSDVDDGVDKQTRVNSSYDLPGSMQNRGRPIARTKCLRIAPTGRSWAAA
TTEGVLVYSMDDNFIFDPTDLDIDVTPEAIEAALGENQPSRALILSLRLNEDNLIKKCIV
AVAPVDIKAVVASIPFKYLNRLIQTFAELLENCPHLEFILRWCQELSKCHGHSIQQNSRN
LLPALKSLQKAITRLHQDLGDTCSSNEYMLRYLCSTTSKP
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgaactaccgcttccaaaaccttctcggagcaccataccgaggcggaaacgccgtcgtt
tccaacaacactctcttaatctccccaatcggcaaccgcatctccgtcaccgacctcctc
aaatccgaaaccctaaccctaccattccaatcttcatccaacatctccagaatcgccgcc
tcaccggacggcgttttcctcatcgccgtcgacgacaacggccgctgccagttcatcaac
ctccgccgccgcgctgtgctccaccggatgcagtttaagaagcctgtttcctgcatcaag
ttcagccctaacggagagtttattgccgttggtgctggtaagttagtcgagatttggagg
tctccagggtttaggaaggagttttttccgtttgaattggtgagaacttttgctaattgt
aataataaagttacttgtgttgattggagtcctgattcgaagtatttgttagccggttcg
aaggatttaaccgttaggttgtttagtttgaagaaagttaggggtgaggttagtagtaag
agtaagccttttatgtttttaggtcatagagaagcgatagtgggagcgtttttcggagtc
gataagaaaacgaatgcggttgataaggtttatacgttgtcgcgggacggggcgattttt
gggtggaggtatgttgatgagaaacttgacgaaccggaatctccgggtacgcctgaacga
atggaagtggatggaataagtgacgtgaagaaacggaagaatgttgatgttgacgatgaa
cgaaatggtggttttgaattgcataaaggaaagtgggaattggtgaagaaggactttttt
atgcaggcccctgcgaagttaacggcttgtgattatcataaagggttggagcttgtggtg
gtggggttttcgagtggggtgtttgggttgtatcagatgccggattttgtttgtatacac
ttgttgtcggtgtcgagagagaagattacgacggctagttttaatgagcttgggaattgg
ttgactttcgggtgtgcgaagcttggacagttgcttgtttgggagtggaaatcggagagt
tatattttgaagcaacaggggcattattttgatgttaatacgattgcgtattcgcctgat
tcgcagcttttagctactggtgcggatgataacaaaatcaaggtttggaacgtgtcatca
ggattttgttttgtgacattttccgagcatacgaatgcagtcaccgcacttcatttcatg
gctagcaaccattgtttactgagtgcatctttagatggcacggttcgtgcatgggatctg
ttccgttatagaaattttaggacgtttacaaccccgtcatctcgacagtttgtttctttg
gcatcggatcaaagtggtgaagtaatttgtgctggaacacttgattcgtttgagattttt
gtttggtcgatgaaaacgggtcggttgttggatgttcttagcggtcatgaaggtccagtt
cacggattgatgttttctcctacaaatgcaattctggcatcatcttcatgggacagaacc
gtccgattatgggacgttttcgatggaaaaggttcagtcgaaacatttccacacactcac
gatgttcttactgtcgtttatcgtccagacggcaagcaactggcttgtagcacattagac
ggccaaattcatttctgggatccaatcgacgggctgttaatgtacaccattgaggggcgg
cgcgacattgctggcgggcggttgatgaccgaccgtagaacagctgccaattccacttcc
ggaaaatgtttcactactctgtcgtattctgccgatgggaattatatattagctggtgga
agtagtagatacatttgtatgtatgatgttgctgatcaggtattgcttcgcaaattccaa
ataacgctaaatctatcgctagatggagttctcgacgtattaaactcaaagaacatgacg
gatgcgggcccattaaatctgattgatgacgataatagtgacgtggatgatggtgttgac
aaacaaacacgggtcaactcatcttacgatctaccagggtcaatgcagaaccgtggcagg
cctatagctagaacaaaatgtttacgaattgcacccacgggccgcagttgggctgctgcg
acaactgaaggggttttggtttattcaatggatgataatttcatatttgaccccacggat
cttgatattgatgttacacccgaggcaattgaagcagctctcggtgaaaatcaaccaagc
agagcgttaatccttagtttacggttaaacgaagacaatttaataaaaaagtgcatcgtt
gctgtggctccagtggacattaaagccgttgttgcatcaatcccttttaaatatttaaat
cgattgattcagacttttgctgagcttctggaaaactgccctcatttggaattcattctt
cggtggtgtcaggagctttctaaatgccacggtcattcgattcagcaaaactcgaggaat
ttgcttccggctttgaaatcattgcagaaagcgattacaagattacatcaagatttaggc
gatacgtgttcttccaacgagtatatgctacgatatctatgttctacaacctccaaacca
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (38)   

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