KEGG   Helianthus annuus (common sunflower): 110937055
Entry
110937055         CDS       T05101                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a isoform X1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110937055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110937055
   03032 DNA replication proteins [BR:han03032]
    110937055
Spliceosome [BR:han03041]
 Complex A
  U1 snRNP components
   Sm proteins
    110937055
  U2 snRNP components
    110937055
 Complex B
  U1 snRNP components
    110937055
  U4/U6.U5 tri-snRNP components
    110937055
 Complex C
  U2 snRNP components
    110937055
DNA replication proteins [BR:han03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     110937055
SSDB
Motif
Pfam: LSM Gemin7
Other DBs
NCBI-GeneID: 110937055
NCBI-ProteinID: XP_022035155
Position
6:101356847..101359737
AA seq 114 aa
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTMKGKNPLTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAVGRGRGRGRGRGRGRGR
NT seq 345 nt   +upstreamnt  +downstreamnt
atgaagctcgtcaggtttctgatgaagttgaacaacgaaacggtctccattgagctcaag
aacgggacagttgtacatggaactatcactggtgttgatattagcatgaacacacacttg
aagacggtgaagttgacaatgaaaggcaaaaatcccttaacccttgatcatctgagtgtg
agaggcaataacattcgttactatatacttcctgacagcttaaatttggagactttgcta
gttgaggaaacacctagagtcaaacccaagaagccaactgcagggcgggctgtaggacgt
gggaggggacgaggacggggccgtggacgtggacgtgggcgatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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