KEGG   Helianthus annuus (common sunflower): 110937878
Entry
110937878         CDS       T05101                                 
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
  KO
K18998  RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:han01009]
    110937878
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:han03021]
    110937878
Enzymes [BR:han01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     110937878
Protein phosphatases and associated proteins [BR:han01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   110937878
Transcription machinery [BR:han03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     110937878
SSDB
Motif
Pfam: dsrm NIF
Other DBs
NCBI-GeneID: 110937878
NCBI-ProteinID: XP_022036026
Position
4:199732494..199742766
AA seq 954 aa
MYKSVVAVYDGERMLGDVEVYYNPHLMNLNMREKLKDKIRISYYSTPSERCSPLAVLHTI
TSPPVGVCLKLECVNNINLNSQLSVLHSTCLRENKTAVVSLGGDELHLVAMRSRRNELLP
CFWGFSVAPGLYESCLVMLNLRCLGIVFDLDETLIVANTSRSFEDRIEALQRKVSCEIDP
QRIAGMLSEIKRYQDDRNILKQYAESDQVVENGKIIKAQSEVVPALSDNHQTLVRPLIRL
QEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWR
LLDPDSNLITVKELLNRIVCVKSGLKKSLFNVFQDGNCHPKMALVIDDRLKVWDERDQPR
VHVVPAFAPYYAPQAEANSAVPILCVARNVACNVRGGFFKEFDDVLLQRINEVAHEDEIK
DILPPDVSNYLISEDDALALNGNKESLGFDGMADVEVERRLKEAIASSNIAPAIASANIA
PVIPKLDSVLKTTFQYNTTPASMPIVPPGPIVQYPNKQLTPVLEPLTQVTHQETSLHSSP
AREEGEVPESELDPDTRRRLLILQHGMDMREPTTTEPQPPQFPVRPPPPMQVSAPRVEPR
GGGWFPVGEEMGPRQLNRIAQPPKEFPLHSEAMHIDKKHTLMAPPFVHKVEASVLPERIL
ENQRLPKEVLQRDDSLRLSHSPPVYPSFPGEGSSMGQSSSSNRDMDIETGGNDTFAESPA
EYLHFIAFKCGAKVEFRPALLPSIDLQFSFEVWFAGEKVGEGTGRTRREAQHQAAESSLM
NLAGNVGADKYLSRQKSGDDGRFINDGNSFGNLREESMAFPTSSGPAKLEIPRKGSIAAL
NELCMMEGLALTFQPQPQVSTSMGQNNELYAQVEIDGEVWGKGVGLTWDEAKMQAAETAF
VNLKARIGQYPQKRQPSPRSFQGMPTKRFRPEYPRVLQRMPSSARYPKNASPVP
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgtataaatcggtggtggctgtgtatgacggtgaaagaatgcttggtgatgttgaggtt
tattataatcctcatctgatgaatctgaacatgagagagaaattgaaggataaaatcagg
atatcgtattattctacaccgagtgagagatgctcgccacttgctgttctgcatacaatc
acttcaccgccagttggagtttgcttgaaattggagtgcgtcaacaacatcaatttgaac
tcgcaactgagtgttttgcactctacttgtctcagggagaataagactgctgttgtttca
cttggtggggatgaactacacttggtagccatgcgttctagaagaaacgaattattacca
tgtttttggggatttagtgttgcaccgggactttatgagtcatgtcttgtcatgctaaac
ctaagatgtctcggcattgtttttgaccttgatgaaactcttatagtggccaatacttca
agatcatttgaggatagaattgaagctttacaaaggaaagtaagctgtgagattgatcca
caacggattgctggtatgctttccgagattaaacgttatcaagatgatagaaatatctta
aagcaatatgcagaaagtgatcaagttgttgaaaacggcaagataattaaagcacagtcc
gaggttgtccctgctctgtcagacaatcatcaaacccttgttcgcccacttataagattg
caggagaaaaacatcattcttacccgtatcaacccacagatccgcgatacgagtgtcctt
gtgcgattgagacctgcatgggaggatcttagaagctacttgatagcaagaggacgaaaa
cgatttgaggtttacgtttgtacaatggctgaaagagattatgctttggaaatgtggagg
cttcttgatccagattcaaatttaataaccgtaaaagagttactgaatcgtatcgtgtgt
gtgaaatctggtttgaagaaatcactttttaatgttttccaagatggaaactgtcatcct
aagatggcattagttattgatgatcgtttgaaagtgtgggatgagagagatcagcctcgt
gttcatgttgttcccgcctttgctccatattatgctcctcaagctgaagcaaacagtgct
gttcctatcctttgtgttgctagaaatgttgcttgcaatgtcagaggtggttttttcaaa
gagtttgatgatgttcttctgcaacgaatcaatgaagttgcacatgaagatgaaatcaaa
gatatattgcctccagatgtgagcaactatttgatttctgaggatgatgctttggcttta
aatgggaacaaagaatcactcggttttgatggaatggctgatgttgaagtggaaagaaga
ttaaaggaagctatagcctcatcaaatatagctccggctattgcttcagcaaatatagct
ccagtgatacctaaacttgattcggtactcaagacaactttccagtacaataccacacct
gcatcaatgcctattgtgcctccaggtccaatcgtccaataccccaataaacaactgaca
cctgtactcgaaccattaactcaagtgacccatcaagaaacaagcttacacagttcacct
gcacgggaagaaggtgaggtgccagaatctgagctagaccctgacacaagacgcagactt
ctcattttacaacacggtatggacatgagagaaccaaccaccactgaaccacaaccacct
cagtttcctgtaagaccaccacctccaatgcaagtttctgctcctcgggttgagccacgt
ggcggtgggtggttcccagtgggtgaagaaatgggccctagacagttgaaccggatagca
caacctcctaaagaatttcctttacattctgaagctatgcatattgataaaaaacacact
cttatggcaccaccctttgttcataaggtggaagcttctgtactgcctgagagaattctt
gaaaatcagaggcttcctaaggaggttcttcagagagatgatagcttgaggttaagccat
tcacctcctgtttacccctcgtttccaggagagggaagttctatgggccaatcatcatcc
agcaacagagatatggacattgaaacaggtggcaatgatacttttgcagaatcccctgct
gaatatctacattttatcgccttcaagtgcggagccaaggtggaattcaggccggctctt
ctccctagcattgatctgcagttttcttttgaggtttggtttgctggagaaaaggtcggc
gaaggaactggaaggacccgaagggaagctcaacatcaagccgctgagtcatctcttatg
aatttggcaggcaatgttggtgcagataagtatttatctcgtcaaaaatcaggagacgat
ggaaggtttataaatgacggaaattctttcgggaatttaagggaggaatctatggccttt
ccaacttcttctggaccagctaagctagagattccaagaaaagggtcaattgctgcactt
aatgaattatgcatgatggaaggtttggctttgacttttcaacctcagcctcaagtctca
actagtatgggccagaacaatgaactatatgcacaggttgaaatagatggggaagtgtgg
ggtaagggagttgggttaacatgggacgaagctaagatgcaggctgctgaaactgctttt
gtaaatttgaaagcgagaatcgggcaataccctcaaaaacgtcaaccttctcccagatca
tttcaaggaatgccaacgaaacggtttagaccagagtacccaagagttttgcaaagaatg
ccttcttccgcaagataccccaagaacgcttcacccgttccttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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