KEGG   Helianthus annuus (common sunflower): 110941613
Entry
110941613         CDS       T05101                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110941613
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:han01002]
    110941613
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:han03021]
    110941613
   03036 Chromosome and associated proteins [BR:han03036]
    110941613
Peptidases and inhibitors [BR:han01002]
 Metallo peptidases
  Family M1
   110941613
Transcription machinery [BR:han03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110941613
   Coactivators
    SAGA/TFTC/STAGA complex
     110941613
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     110941613
SSDB
Motif
Pfam: Peptidase_M1 HEAT_2 Peptidase_M1_N Tim54 LIM_bind
Other DBs
NCBI-GeneID: 110941613
NCBI-ProteinID: XP_022038962
Position
5:142869687..142883030
AA seq 1372 aa
MAKPRKHKTEDQKADNSEAVVKHQKLCLAIDLEKRRIYGYTELEVAVPENGIVGLHADNL
MIECVTVDGEPARFEIFPHYQQMDSDDRWCSVSSTNSAADAAGSVYVSCLERELVPNLLI
MCSNEATTKPVPEQLEETVQENGTQTSSESKQNVKLIRIDYWVEKIETGIHIEKDVMHTN
NQIRRARCWFPCMDDSLQRCCFDLEFTVANNLVAASTGTLMYQVLTNDDPPRKTYIYKIN
VPVAAQWISLAVAPFEIFPDRHNNLITHICLSHNLPKLRNTVGFLYSAYSHYEHYLSTKF
PFGSYTQVFIDPEMAISSLSLGASMNIFSSQILFDEKIIDQTIDTRIKLAYGLARQWFGV
YITAEAPNDEWLLDGLAWFLTDSFIKQFLGNNEARYRRYKANCAVCKADDSAATALSSSD
ASKALYGTQCIGFYGKIRSWKSVAVLQMLEKQMGPESFCKVLKNLVAPPKDTTHPLRTLS
TKEFRHLANEVGNLERPFLREFFPRWVGSSGCPVLKMGFSYNKRKNLVELAALRGCTATP
DSNPTYPNSKPDFVKREADAGWPGMMSIRVHELDGMYDHPVLPMAGETWQLLEIQCHSRL
ASKRFQKPKKGPKHDGSDDNADTVASVDMRSNSNDSPLQWLRADPEMEYLAEIHFNQPVQ
MWINQLEKDKDVVAQVQAITALELFPRLLSIVNALSNLLCDSQAFWRVRIEAAFALASTA
SEETDWAGLLHLIKFYKSRRYDEKIGLPKPNDFHDFAEYFVLEAIPHAVALVRAPDKKSP
REAVEFILQLLKYNENNGNPYSDVFWLAALVQSVGELEFGQQTVAFLSSLVKRIDRLLQF
DRLMPSYNGILTVSCIRTLTQIALKLSEFTPLDRIFDLIKPFSSSKTQWQVRIEAFRALL
DLEYHCKGIDAALILFIKYLEEEPSLRGQVKLGVHAMRLCQISGDADDDHGVMQGTLVAL
LRLLESPVAFNNVTLRHYLFCILQVLAGRPPTLCGVPRDETVIKGHTEICNELKNFFAAI
VNQSKPAEPSLDALMLPCDEPANETNTETNIVSITDNERTQPQDITLTLTEPDVVPKEGN
DNNEQKPPDLIILDSSEAHKEPDTVSNSQERKKPVLKIRMKQSSAASSRAEDVVDNAVLE
RSQGAHNGGDHGTSSSMSMDAPPQRNFIEPANVGNQNVDDVNSCHDLGSRVTASIGSAKL
PHDGHDDGVGDGDATLLKELQCTAESSKVQSNDVETVNHNKYISLRALNEGVDGLLAGPS
NQAVSGNKEKEKDKKKKDKEKKRKKKDKDDPEYLERKRLKKEKKRKEKELAKLMATPPLI
DAKQTESVKDEVAVARVTNVTTPVDGVVKRPEGTTSTHKLKIKIKNRTLTKP
NT seq 4119 nt   +upstreamnt  +downstreamnt
atggcaaaacctcgaaagcataagaccgaagatcaaaaagccgataattcagaagctgtg
gtgaaacatcagaagctatgcctcgcaatcgatctcgaaaaacgtcgaatctacgggtat
accgagcttgaagtagctgtcccagagaatggtattgtggggttacatgctgacaatttg
atgattgagtgtgtaactgtcgatggagagccagcaaggtttgaaatattccctcactat
cagcaaatggacagtgacgacagatggtgctctgtttcttcaactaattctgctgctgat
gctgcgggttcagtatatgtttcatgtcttgaaagagaattggtgcccaatttgttgatt
atgtgctctaatgaggctaccaccaaaccagtgcctgagcagctagaagagacggtgcaa
gaaaatgggacccaaacatccagtgaatccaagcagaatgtaaaattgatccgcatcgat
tactgggtggagaagatagaaacaggaatacatattgaaaaggatgttatgcacacaaat
aatcagataagacgtgctcgttgttggttcccttgtatggatgatagtttacaacgttgc
tgctttgacttggagttcacggtggccaacaaccttgttgctgccagcactggaaccttg
atgtatcaggttttgaccaatgatgaccctccacgtaagacatacatctataaaataaat
gtacctgttgcagctcaatggatatctctggctgtcgctccattcgaaatatttcctgat
cgtcataataatcttataacacacatatgcttgtcacacaacttgccaaagcttcggaac
acagtgggatttctttatagtgcatacagccattatgaacattacctttccaccaaattt
ccatttgggtcatacacacaagtttttatcgacccggagatggcaatatcgtctttgagc
ttgggtgcatcaatgaatatctttagctcacaaattctttttgatgagaaaatcattgat
cagacgatagatacaagaataaaacttgcgtatggtcttgcaagacaatggtttggggtc
tatatcactgcagaggcaccaaatgacgagtggttattggatggacttgcttggttcttg
acggactcatttattaagcaatttctaggaaacaatgaagcacggtataggcgttataag
gcaaattgtgctgtttgcaaagcagatgatagtgctgcaactgccttgagctcttctgac
gcttccaaggctttgtatggaacacagtgcattggtttttatggaaaaattaggtcttgg
aaatctgttgcggttctacaaatgttggaaaagcagatgggtcctgagtcattctgtaaa
gtcttaaagaatctggttgcacctcctaaagatacaactcaccccttgagaacccttagc
acaaaagagtttcggcacttggctaatgaagtaggcaatcttgagcgcccatttctaaga
gagttttttcctcgctgggtgggttctagcggttgccctgttttaaagatggggttttca
tataacaaacggaagaacctggttgaattagcagctttgcgtgggtgtacagccacacca
gattcaaatcccacttatcccaattcaaaacccgattttgtgaaacgagaagctgatgct
ggatggcccggaatgatgagtatacgggttcatgaacttgatgggatgtatgatcatcct
gttttaccaatggcgggggaaacatggcagcttctagaaatacaatgccattctagactt
gcttccaaacgttttcaaaagccaaagaaagggccgaagcatgatggttctgatgataat
gcggatacagttgcctctgtagatatgcgttccaacagcaatgattcccccctgcaatgg
ctcagggccgaccctgaaatggagtatcttgccgagattcatttcaaccaacctgtacag
atgtggataaatcaattggagaaggacaaggatgttgttgctcaagtacaagcaattaca
gcactagagttgtttcctcgtcttctctcaattgtcaatgcgttaagtaatctcctctgc
gattctcaggcattttggcgagtgcggattgaggcggcttttgctctggctagcacagca
tctgaggaaactgattgggctggtttactgcacctgattaagttctataaaagtcgaaga
tacgatgagaagattggactcccaaagccgaatgacttccatgattttgctgagtatttt
gtacttgaggctattccgcatgcagttgctttggttagagcgccagacaaaaagagccct
agggaagctgttgagttcattttacaacttttgaagtacaatgaaaacaatgggaatccc
tactctgatgttttctggcttgctgcattggtccaatcagttggtgaacttgaatttgga
caacagacagttgcttttctatcttctcttgtgaaacgcatagaccggttattacagttt
gacaggctgatgccaagctacaatggaatcctgacagttagctgcattcgaacactaaca
caaattgcattgaagctttcagaattcacccctctagatcgtatctttgatttgattaaa
cccttttcctcttctaagacacaatggcaagttcgaatcgaagcattccgggcacttctt
gacctcgagtatcactgcaaaggaatcgatgcagcattgattttatttattaaatatttg
gaggaggagccttcattaagaggtcaagtgaaattgggtgtgcatgctatgcggttatgt
caaataagcggtgatgcggatgacgaccatggtgtgatgcagggaactctcgtggcacta
cttcgtcttcttgaaagcccagtagcatttaacaatgttacactacgccattatttattc
tgcattttacaagtcctggctggaagaccaccgacactttgtggagttcctagagatgaa
acggtgatcaagggccacacggaaatttgcaatgaacttaaaaacttctttgccgctatt
gtgaaccaatctaagcctgcagagccgtctttagatgcgcttatgcttccgtgtgacgag
cctgcaaatgaaacgaacacagaaacaaatatcgtttccattactgataacgagagaacc
cagcctcaagacattactctgacgttgaccgaacccgatgtagtaccaaaagaaggaaac
gacaataacgaacaaaagccaccagatttgatcattcttgattcttcagaagctcataaa
gaaccagatacggtttcaaacagtcaagaacgaaaaaaacccgtgttgaaaatcagaatg
aagcaatcatctgctgcttctagtagagccgaggatgttgtcgataatgctgttttagag
cgatctcaaggtgcccataatggcggtgatcacggaacaagtagttccatgtccatggat
gcaccaccgcaaagaaatttcatcgagcctgcgaatgtcggtaatcaaaacgttgatgat
gttaactcatgccatgatctcgggtcacgtgtaactgccagtatcggcagtgctaaacta
cctcatgatgggcatgatgatggtgtgggtgatggtgatgccacacttttaaaggaacta
cagtgtactgctgaatcaagtaaagttcaatctaatgatgtggaaaccgtgaatcataac
aagtacattagtcttcgagccctcaatgaaggtgttgatggtttgttggcgggaccctcg
aatcaagcggtttcgggtaataaagaaaaggagaaggataagaaaaagaaagacaaggaa
aagaaaagaaaaaagaaagataaagacgatccggagtatttggagcggaaacggttaaag
aaagaaaaaaagcgaaaagaaaaggaattggctaaactgatggcaacgccacctttaata
gatgcgaaacaaaccgaatctgttaaagatgaggtggcggttgctcgagtgacaaatgtc
acgacaccagtggacggtgtggtaaagcgtcccgaaggtactacttcaactcacaaactc
aaaataaaaataaaaaacagaacattgaccaaaccatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

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