KEGG   Glaesserella parasuis SH0165: HAPS_0117
Entry
HAPS_0117         CDS       T00825                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
hap  Glaesserella parasuis SH0165
Pathway
hap00470  D-Amino acid metabolism
hap00550  Peptidoglycan biosynthesis
hap01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hap00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HAPS_0117 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HAPS_0117 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hap01011]
    HAPS_0117 (murD)
Enzymes [BR:hap01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     HAPS_0117 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:hap01011]
 Precursor biosynthesis
  Amino acid ligase
   HAPS_0117 (murD)
SSDB
Motif
Pfam: MurD-like_N Mur_ligase_M Mur_ligase_C NAD_binding_7 Pyr_redox 2-Hacid_dh_C 3HCDH_N NAD_binding_8 TrkA_N UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: ACL31816
UniProt: B8F3B4
Position
127085..128383
AA seq 432 aa
MQNQYQGKTITIIGLGTTGLSCVEFFADKQAQVRVIDTRANPAGADKLSKDIPLHTGSLN
LEWLLSSDLIVISPGLALATAEIQQAIQAGVEVVGDIELFYREAKAPIIAITGSNGKSTV
TTLTTEMAKQAGVKVGMGGNIGVPALSLLKGDYELYVLELSSFQLETTYSLKAKAATILN
ISEDHMDRYESIEDYRQAKLKIYHHAENVIVNGEDPQTFPEQAVGSLKKFAEKDAEYTAC
NGELYSGDEAVIAIDELKITGRHNVMNALASMSLAEAAGVDRSGIVKALQSYSGLDHRFQ
LVPTNDGVRWINDSKATNVGSTVAALNGLQVEGTLYLLLGGDGKDADFSELKPFINQPNT
VCYCFGKDGAELAALTQNSVLVETMEQAVAQIRLRLKAGDMVLLSPACASLDQFKNFEER
GRQFVALAQGVI
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgcaaaatcaatatcaaggcaaaactatcacaattatcggcttaggcacaacaggctta
tcttgtgtcgaattttttgcggacaaacaggctcaagtgcgagtgattgatacccgagca
aatcctgcaggggcggataagttgtcgaaggatattccactacacacaggcagtttaaac
cttgagtggctattaagctccgacttaattgtgattagcccgggacttgctttagcaact
gctgaaattcagcaagctattcaagccggtgtggaggtggttggcgatattgagttgttc
tatcgtgaagccaaagcgccgattattgcgattacaggctcgaacggtaaaagtaccgtc
acgactttgacgactgaaatggcaaaacaagccggagttaaagttggaatgggtggcaat
atcggcgtgccggcattgagtttattgaaaggcgattacgagctttatgtgttggaatta
tcgagttttcaacttgaaacgacctattctttaaaagcaaaagcggcgaccattttaaat
atcagcgaagatcatatggatcgctatgagagcattgaagattatcgccaagcgaaattg
aaaatttatcaccatgccgaaaatgtaattgtgaatggcgaagatccgcaaactttccct
gaacaagcggtcggatctttgaaaaaatttgcagaaaaagacgcagaatataccgcttgt
aatggagaactctattctggcgatgaagccgtcattgcgattgatgagctgaaaattact
ggtcgccacaatgtgatgaatgccttagcatcaatgtcattggcggaagctgcaggcgtt
gatcgttcgggtattgtgaaagcactacaaagctattcaggattagatcaccgtttccag
ctagtaccgacgaatgatggcgtacgctggattaacgactcaaaagccacgaatgtcggc
agtactgtggcggcattaaatggtttgcaagtcgaaggaacgctttatctgttgttgggc
ggtgacggaaaagatgctgatttttctgagttaaaaccttttattaatcaaccaaataca
gtctgttactgcttcggaaaagatggggcggaactcgccgctttaactcaaaatagcgtt
ttagtggaaacaatggaacaagctgtcgcacaaattcgtttaagattaaaagcgggcgat
atggtgctactttcaccagcttgtgcaagtttagatcagtttaaaaattttgaagagcgt
ggcagacagtttgtggcgttggctcaaggggttatctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (34)   

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