KEGG   Haloplanus rubicundus CBA1112: DU484_03110
Entry
DU484_03110       CDS       T05557                                 
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase
  KO
K01880  glycyl-tRNA synthetase [EC:6.1.1.14]
Organism
haq  Haloplanus rubicundus CBA1112
Pathway
haq00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:haq00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DU484_03110 (glyS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:haq01007]
    DU484_03110 (glyS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:haq03016]
    DU484_03110 (glyS)
   03029 Mitochondrial biogenesis [BR:haq03029]
    DU484_03110 (glyS)
Enzymes [BR:haq01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     DU484_03110 (glyS)
Amino acid related enzymes [BR:haq01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   DU484_03110 (glyS)
Transfer RNA biogenesis [BR:haq03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    DU484_03110 (glyS)
Mitochondrial biogenesis [BR:haq03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    DU484_03110 (glyS)
SSDB
Motif
Pfam: HGTP_anticodon tRNA-synt_2b zf-ribbon_3 DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AXG08932
UniProt: A0A345E9R0
Position
complement(440717..442534)
AA seq 605 aa
MSDGTAITELAKRRGFFFGANEAYGGVAGFYTFGPEGAALKRNVEAAWRDRFTVREGNDE
IEAPTIAPESVFEASGHLDGFDDMLVECGECGESHRADHLIEDASDIEEAESLPLPEVEE
LIAEYEVACPSCGAPLAGRSVEEFNLMFETAIGPGSGQPGYLRPETAQGIFVEFPRLKEY
ARNKLPFGITQIGRAYRNEISPRKGIVRTREFTQAELEQFVDPDTDEPPLSRVADVSVKL
YPADEQEDPDGGYVETTVGEAVEEGIVASDWVGYYLGVAREWYDRIGVDGDRFRFRQHLP
GERAHYAADCWDAESEVGGVVDDPDDPTDGDWIEIAGFAYRGDYDLSKHADHGDDDFTVF
EQYDEPRTVERAVVDPDMSVLGPEFGGRAGDVADALHALAERNPDAFDGDEVTVEVGGED
VAVDADVANFRIEEQTEAGEHVTPHVVEPSFGVDRTVYTLIAHAYDQDLIDGEERTYLSL
APEVAPTDVAVFPLVGDDALETLADEVVNDLRGAGLSVAHDDSGNIGRRYRRQDEVGTPL
SVTVDHESVERDEATVTVRDRDTTAQVRVPVADLAEQLEAVLAAGGTFESLLEAYDAVET
DVTRS
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgagcgacggcaccgccatcaccgaactcgcgaagcgccggggcttcttcttcggcgcg
aacgaggcctacggcggcgtcgccggcttctacaccttcggtcccgagggcgcggccctg
aagcggaacgtcgaggcggcgtggcgcgaccgcttcaccgtccgcgagggcaacgacgaa
atcgaggcgccgaccatcgcgcccgaatccgtcttcgaggcgtccggccacctcgacggc
ttcgacgacatgctcgtcgagtgcggcgagtgcggcgagagccaccgcgccgaccacctg
atcgaggacgcgagcgatatcgaggaggccgagagcctaccgctccccgaggtagaggag
ttgatcgccgagtacgaagtggcctgcccgtcctgtggcgcccccctcgccggccggtcg
gtcgaggagttcaacctcatgttcgagacggccatcggtcccggctccggccagcccggc
tacctccggcccgagacggcacagggcatcttcgtcgagttcccgcggctgaaggagtac
gcccggaacaaactcccgttcgggatcacacagatcggtcgggcctaccgcaacgagatc
agtccgcgcaagggtatcgtccgcacccgggagttcacgcaggccgagttggagcagttc
gtcgaccccgacaccgacgaaccgcccctctcccgcgtcgccgacgtgtcggtgaaactc
taccccgccgacgagcaggaggaccccgacggcggctacgtcgagaccacagtcggcgag
gcggtcgaggagggcatcgtcgccagcgactgggtgggctactacctcggcgtcgcccgc
gagtggtacgaccggatcggcgtcgacggcgaccggttccggttccgccagcacctcccc
ggcgagcgtgcccactacgccgcggactgttgggacgccgagagcgaagtcggcggcgtg
gtcgacgaccccgacgatccgaccgacggcgactggatcgaaatcgcgggcttcgcctac
cgcggcgactacgacctttccaagcacgccgaccacggcgacgacgacttcaccgttttc
gagcagtacgacgaaccccggacggtcgagcgggcggtcgtcgaccccgacatgagcgtc
ctcggccccgagttcggcgggcgggcgggcgacgtggccgacgctctgcacgccctcgcg
gaacggaaccccgacgccttcgacggcgacgaggtgaccgtcgaggtgggcggcgaggac
gtggccgtcgacgccgacgtggcgaacttccggatcgaggagcagacggaggcgggcgaa
cacgtcacgccccacgtcgtcgaaccctccttcggcgtcgaccggacggtgtacacgctg
atcgcgcacgcgtacgatcaggacctgatcgacggcgaggagcgcacgtatctctcgctg
gcgccggaggtggcgccgacggacgtggcggtgttcccgctggtgggcgacgacgcgctc
gaaacgctcgccgacgaggtggtgaacgacctccgcggcgccggtctgtcggtcgcccac
gacgactcgggcaacatcgggcgccggtaccgccggcaggacgaggtcggcacgccgctg
tcggtgacggtcgatcacgagagcgtcgagcgcgacgaggcgacggtgacggttcgggac
cgcgacacgacggcacaggttcgggtgccggtcgcggacctcgccgagcaactggaggcg
gttctcgccgccggcggcaccttcgagagcctgctcgaagcgtacgacgcggtcgagacg
gacgtgacgcgctcctga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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