KEGG   Haloplanus rubicundus CBA1112: DU484_15950
Entry
DU484_15950       CDS       T05557                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
haq  Haloplanus rubicundus CBA1112
Pathway
haq03030  DNA replication
haq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:haq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU484_15950 (fen)
   03410 Base excision repair
    DU484_15950 (fen)
   03450 Non-homologous end-joining
    DU484_15950 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haq03032]
    DU484_15950 (fen)
   03400 DNA repair and recombination proteins [BR:haq03400]
    DU484_15950 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:haq04147]
    DU484_15950 (fen)
DNA replication proteins [BR:haq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DU484_15950 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DU484_15950 (fen)
DNA repair and recombination proteins [BR:haq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DU484_15950 (fen)
Exosome [BR:haq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DU484_15950 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: AXG11220
UniProt: A0A345EG98
Position
2896452..2897432
AA seq 326 aa
MGNADLRQLAALRDVTWDEVAGSVVAVDAHNWLYRYLTTTVKWTNDAAYTTSGGEEVANL
VGVVQGLPKFFDHDLTPVFVFDGGVTDLKEAEVSERREKRERAEERLAEAEERGDAIEAA
RLEARTQRLTDTILETTRELLALLDVPTVDAPAEGEAQAAYMARRGDADYAGSEDYDTLL
FGAPRTLRQLTSKGQPELMDLDATLERHDITLEQLIDVAILCGTDFNPGVDGVGPKTALG
AITEHGDLWAAVEAEGWQVPNADRVRDLFRNPPVTDDYAVDADIDPDVAAAREYVTETWE
IDTDEVERGFERIEASLVQTGLDRWT
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggcaacgcagacctccggcaactcgccgcgctccgggacgtgacgtgggacgaggtg
gcgggcagcgtcgtcgccgtcgacgcgcacaactggctgtacagatatctgacgacgacg
gtcaagtggacgaacgacgcggcctacacgacgagcgggggcgaggaggtggcgaacctc
gtcggcgtcgtgcagggactccccaagttcttcgaccacgacctgacgcccgtcttcgtc
ttcgacgggggcgtcaccgacctgaaggaggcggaggtgtccgaacgccgcgagaagcgc
gaacgcgccgaggaacggcttgccgaggcggaggaacgcggcgacgccatcgaggccgct
cgcctcgaagcccgcacccagcgtctgaccgacacgattctggagacgacccgggaactc
ctcgccttgctggacgtgccgaccgtcgacgcgcccgcggaaggagaggcgcaggcggcg
tacatggcccgccggggcgacgccgactacgctggcagcgaggactacgacaccctgctc
ttcggcgcaccgcgtacgctccgccaactgacgagcaaggggcagcccgaactgatggac
ctcgacgcgacgctggagcgccacgacatcacgctggaacaactgatcgacgtggccatc
ctctgtgggacggacttcaaccccggcgtcgacggcgtgggaccgaagacggcgctcgga
gcgatcacggagcacggcgacctgtgggccgccgtcgaggccgagggctggcaggtgccg
aacgccgaccgggtgcgtgacctctttcgcaaccccccggtgaccgacgactacgcggtc
gacgccgacatcgaccccgacgtggccgccgcgcgcgagtacgtgaccgagacgtgggag
atcgacaccgacgaggtcgaacgcggcttcgagcgcatcgaggcgtcgctggtccagacc
ggcctcgatcgctggacgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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