KEGG   Herminiimonas arsenicoxydans: HEAR0708
Entry
HEAR0708          CDS       T00490                                 
Name
(GenBank) putative ATP-dependent exoDNAse (exonuclease V) beta subunit RecB
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
har  Herminiimonas arsenicoxydans
Brite
KEGG Orthology (KO) [BR:har00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:har03400]
    HEAR0708
Enzymes [BR:har01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HEAR0708
DNA repair and recombination proteins [BR:har03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     HEAR0708
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_22 PDDEXK_1 AAA_30 DEAD ResIII
Other DBs
NCBI-ProteinID: CAL60902
UniProt: A4G315
Position
709781..713071
AA seq 1096 aa
MSDLHINTSAPRAYEINGVQADAERFVAIACDPARSVVVEACAGSGKTWLLVARVLRLLL
AGTEPAAILAITFTRKAAQEMRERLMQLLHELTLKPEADVLTLLRERGVADHELLALLPL
ARGLYERVLRSPQALSIDTFHSWFARLVQIAPLASGVPHGYALTESTGELSSDAYSRFMQ
TVNEADNQEVKDALIALYAQVGDSNARNLLDAFAGKRAEWWASVQNGEPLEWLTELCGED
AEVDARLALWSDEKTVARIGQIAWLLGQGSAVNQERATAIEKALSSGAALENFAALTNEF
FDANGKFRKNRTTKDLTKALLGNLGDEGVYAFEVEFEAVGEALKTILRRSMEPAVIALNR
ALFTVGAAYLETYQAVKAEQRVFDFADLEWQAYRLLTNEEHAAYLQSRLDARYRHVLLDE
FQDTNPLQWSIVQAWLNAYGDDADKPSMFVVGDPKQSIYRFRRAEPRVFSAAKETLVAQG
ADFLRTNQTRRNAAGIVDVLNASFVANPIYQPQTTLEQSPGAVWQLPLVQQDKQEKVVWS
PVQLRDPLTTPREEEEDARRLEEGRAVALAILQARKELKSERWSDVMLLVKKRTHLRAYE
RALREAGIPFASDKRGGLLESLEVADLIALLNFLITPHDNLALAHVLKSPIMAAGDDELI
ALAERREKTWWLRLQAEVTELSSPALLRAAGLLEKWLHLAPRLPVHDLLDRILHEGDVVA
RYAQTASPLVRGQVLGNIEAFTELALNLDAGRYPSLPKFIDALRRLQKSADSDAPDEADI
DAALDAVRILTIHGAKGLEAPIVVLLDANHSDGARDDVGVLCAWPQDRDAPTHFSVFGRQ
AERGAARDTLFAEEEQLKQQEDWNLLYVATTRAKNLLIVSGVADNRSTTVNGVADGRWYA
RFQGAQPVQPDAQAAAAAATGETEFFLPIFNPPALPAPQIEPTAIFSSAEIDEGIALHAL
MELLTPPQAWPITMHAPALIAKWLACTHEMAETISGQASVILAQPELARFFDPAQHRFAR
NEMEVVSSAGVARFDRAVMFDDELWILDYKRNLLESERAAYAAQLERYRVAAQQVFPDVR
IRSGLITVDGRLTELA
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgagtgacctgcacatcaatacgtctgcgccgcgcgcctatgaaattaacggagtacag
gccgacgcagaacgtttcgtcgccattgcctgcgatcctgcgcgttcggtggtggtggaa
gcctgcgccggcagcggcaagacctggctgctggtggcgcgcgtgttgcgcctgctgctg
gccggtaccgagccggcagcgatactggcgattacgtttacgcgcaaggcggcgcaggaa
atgcgcgagcgcctgatgcaattgctgcatgagctgacgctgaagccggaagcggatgtg
ctgacgctgctgcgcgaacgcggcgttgcagatcacgaactgctggcgctgctgccgctg
gcgcgcggtttgtatgagcgtgtattgcgcagtccgcaagcgctctccatcgatactttt
cacagctggtttgcacggctggtccagattgcaccgctggcatccggcgtgccgcacggc
tatgcactgacggagtccaccggcgaattatcgtcggatgcctacagccgtttcatgcaa
acggtgaacgaggccgacaatcaggaggtgaaagatgcgctgattgccctgtacgcacaa
gtcggtgacagtaatgcgcgcaatctgctggatgcatttgcaggcaagcgcgccgaatgg
tgggcttcggtgcagaacggcgagccactcgagtggttgactgaattgtgcggtgaagat
gccgaagtagatgctcgacttgcactgtggtcggatgaaaaaacggtagcccgcatcggc
cagattgcatggctgctcggacagggtagtgcggttaatcaggagcgggcaacggcaata
gaaaaagccttatcgagcggtgccgcgctggaaaatttcgccgcgttgactaatgaattc
ttcgatgcgaatggcaagttccgtaaaaatcgcacgaccaaggatttgaccaaggctcta
ctaggcaatcttggtgacgagggtgtatacgccttcgaggtcgagttcgaggctgtgggc
gaagccctgaagacgatactccgccgcagcatggagccggcggtaattgcgctcaatcgc
gcattgtttacagtcggcgctgcctatctggaaacctatcaggcggtaaaggctgaacag
cgggtattcgatttcgccgatctggaatggcaggcctatcgtctgctgacgaatgaagaa
catgcggcctatctgcaaagccgtctcgatgcgcgctaccgccatgtattgctggatgaa
ttccaggataccaatccgctgcagtggagcatcgtgcaggcgtggctgaatgcctacggt
gacgatgctgacaagcccagcatgtttgtggttggcgatcccaagcaatcgatctatcgc
ttccgtcgcgccgagccacgcgtgttttccgccgcgaaggaaacgctggtggcgcaaggc
gccgacttcctgcgcaccaaccagacacggcgcaatgcggccggcatcgttgacgtcctg
aatgcaagctttgtcgccaatccgatttaccagccgcaaaccacgctggaacaatcgccg
ggcgcagtgtggcaactgcccttggtgcagcaggacaagcaggaaaaagtcgtctggtcg
ccggtgcagttgcgcgacccgctgaccacgccgcgcgaggaagaagaggatgcacgccgg
ctggaagaaggccgtgccgtggcgctggccatcctgcaggcgcggaaggaactcaagagc
gaacgttggtcggacgtgatgctgctggtcaagaagcgtacgcatttgcgcgcctatgag
cgcgccttgcgcgaagccggaattccgtttgcctccgacaagcgcggcggtttgctggag
tcgctggaagtggctgatctgatcgccttgctgaatttcctcattacgccgcacgataat
ctggcgctggcacatgtattgaaatcgccgatcatggcggccggcgacgatgagctgatc
gcgctggcagagcgccgcgaaaaaacatggtggctgcgcttgcaggcagaggtgacagag
ttgtcgtcgccggccttgctgcgcgctgccggcctgctggaaaagtggctgcacctggcg
ccacgcttgccggtgcatgatttgctcgatcgcattctgcatgagggcgatgtcgtcgcg
cgttacgcgcagacggcatcgccgctggtgcgcggccaggtgctgggcaatatcgaagcg
tttaccgaacttgccttgaatctggatgccgggcgttatcctagcctgccgaaattcatc
gatgccttgcgccgcttgcaaaaatccgccgacagcgatgcaccggatgaagccgatatc
gatgccgcgctggatgcggtgcgcatattgacgatacatggcgccaagggactggaagcg
cccatcgtcgtgttgctggacgcgaatcacagcgatggcgcgcgcgacgatgtcggcgtg
ttgtgcgcatggccgcaggatcgcgatgcacctacgcatttttccgtcttcggccgccag
gccgaacgcggcgcggcgcgcgatacgctgtttgccgaggaggaacagttgaagcagcag
gaagactggaacctgctgtacgtcgcgaccacgcgtgcaaaaaatctgctgatcgtcagc
ggtgtagccgataaccgcagtaccacggtgaacggcgtggcagacggccgctggtatgcg
cgcttccagggtgcgcagcctgtgcagccggatgcgcaggctgcggcagcggccgctacc
ggcgaaactgaattcttcttgcctatattcaatccgcctgccttgccggcgcctcagatt
gagccgacggcgattttttccagtgcggaaattgacgaaggcatcgccttgcatgctttg
atggagctgttgacgccaccgcaagcctggcctattaccatgcatgcgccggcactgatc
gcgaaatggctggcgtgtacgcatgaaatggcggaaacaataagtgggcaggccagtgtg
attctggcgcagcctgagctggcgcggtttttcgatccggcgcagcatcgctttgcacgc
aacgaaatggaagtcgtcagcagcgccggcgttgcgcgtttcgatcgcgccgtcatgttc
gacgatgaattgtggatactcgattacaagcgcaatctgctggaaagcgaacgtgcagcg
tacgccgcgcaactcgagcgttaccgtgtagcggcgcaacaggtattccccgatgtgcgt
atccgcagcggattgattacggtagacggacgtttgacggaactggcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (46)   

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