KEGG   Herminiimonas arsenicoxydans: HEAR2431
Entry
HEAR2431          CDS       T00490                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
har  Herminiimonas arsenicoxydans
Brite
KEGG Orthology (KO) [BR:har00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:har03016]
    HEAR2431 (truB)
Enzymes [BR:har01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     HEAR2431 (truB)
Transfer RNA biogenesis [BR:har03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HEAR2431 (truB)
 Prokaryotic type
    HEAR2431 (truB)
SSDB
Motif
Pfam: TruB_N TruB-C_2 TruB_C_2
Other DBs
NCBI-ProteinID: CAL62562
UniProt: A4G7S5
Position
complement(2404352..2405296)
AA seq 314 aa
MTTTPIKKKRVPVHGVLLLDKQAGVSSNDALIKAKWLLNALKAGHTGTLDPFATGLLPLC
FGEATKFAQDLLDADKTYETVVHLGVTTNTGDTEGDVIATHAVDISRQQIDAVLAQFRGD
IEQVPPMYSALKRDGKPLYEYARAGITLEREARPVTIHLLEFVDFQAPFLTLRVRCSKGT
YIRVLGEDIGAALGCGAHLNALRRIQVGDLLIAQAITIEELTAKDADARIAALASVDALL
TSFPALRLSEELAKRFLHGQRLALGKENIVLPEGQGRMRIYRESDGQLLGTGLMQEYSIL
APERLISTVTTSAG
NT seq 945 nt   +upstreamnt  +downstreamnt
atgacaaccactcccatcaagaaaaagcgcgtgccggttcacggcgttttgctgctcgac
aaacaggccggcgtatcgagcaatgacgcactgatcaaggccaagtggttattgaatgcg
ctcaaggccgggcataccggcacgcttgatccctttgcaaccggcttgctgccgctgtgt
tttggcgaggcgaccaagttcgcacaggatttgctcgatgcagacaagacctatgaaacg
gtcgtgcatctgggcgtgaccaccaacacaggcgatactgagggtgacgtaatcgccacg
cacgcagttgacatcagccggcagcaaatcgatgcagtgctggcgcagtttcgcggcgat
atcgaacaagtgccgcccatgtattccgcactcaagcgcgacggcaagcctctgtatgaa
tatgcgcgtgccggtatcacgctggagcgcgaagcgcgtcccgtcaccattcatttgctg
gagttcgtggattttcaggcgccgtttctgactttgcgcgtgcgttgcagcaagggtacg
tatatacgcgttctgggcgaagacatcggtgccgcattgggatgtggcgcgcatctgaat
gccttgcggcgtattcaggtgggcgatttgctgatagcccaagccatcaccatcgaagag
ctcaccgccaaagatgctgatgcacgtatcgctgcgctggcgtcggtcgatgcattgttg
acatcgtttcctgcgctgcgtttgtcggaagagctggccaagcgcttcttgcacggccaa
agactggctttgggaaaagagaatatcgtgctgcctgaaggtcagggcaggatgcgtatt
tatcgtgaaagcgatgggcaattgctgggaacgggattgatgcaggaatacagcattctg
gcgcctgagcgcctgatttctaccgtgacgacaagtgccggataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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