KEGG   Falsihalocynthiibacter arcticus: RC74_05860
Entry
RC74_05860        CDS       T04275                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
hat  Falsihalocynthiibacter arcticus
Pathway
hat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RC74_05860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hat03021]
    RC74_05860
   03019 Messenger RNA biogenesis [BR:hat03019]
    RC74_05860
Transcription machinery [BR:hat03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     RC74_05860
Messenger RNA biogenesis [BR:hat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RC74_05860
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 NACHT ATPase_2 OB_RNB AAA_25 AAA Spore_III_AA
Other DBs
NCBI-ProteinID: AML50868
UniProt: A0A126UXR9
Position
1182090..1183361
AA seq 423 aa
MTENTLNLSELKALKPKDLLSMAEELEIENASTMRKGEIMFHILRERADDDWEVSGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYLSPEMIRSFSMRTGDTVNGVVKAPGDTERYFAMTK
VTSINFQEPERNRHKINFDNLTPLYPDERLIMETDDPTTKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIASSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVNKIDLQKTFVLRRILNPMGTTDAIEFLISKLKQTKTNSDFFDS
MNT
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgactgagaacacccttaatctttctgaacttaaggcgcttaagcccaaagacctgttg
tctatggcggaagagcttgagatcgaaaacgcctctactatgcgcaagggcgagattatg
ttccacattctgcgcgaacgtgcggatgatgattgggaagtgtcgggcgacggcgttctt
gaggttttgcaggacggattcggatttttgcgcagcccagaggcaaactatttgcccggc
cctgatgatatttacctttcacccgagatgatccgctcgttttccatgcgcaccggcgac
acggtaaatggtgttgtgaaggctcccggcgacacagagcgttattttgcgatgacaaaa
gtgacgtcaatcaatttccaagagcctgaacgcaatcgtcacaaaatcaactttgataac
ctgacgccgctctatcctgatgagcggttgatcatggaaaccgacgatccaaccacaaaa
gaccgctctgcgcggatcattgatttggttgcgccgattggtaaaggtcaacgttcgttg
attgttgcgccgccacggaccggtaaaacggttttgttgcagaatattgcgtctagcatc
gagaaaaaccatcctgagtgttatttgatcgttttgctgatcgatgagcgcccagaagag
gtgactgatatgcagcgtagcgtgaaaggcgaggttgtttcctcaacttttgatgagcct
gcaacccgccacgtcgccgtttccgaaatggttatcgaaaaagccaaacgccttgtagag
cataaacgcgatgttgtgatcctgctggattccatcacccgccttggtcgcgcctttaac
acggttgtgccgtcctctggtaaagttctgaccggtggtgtcgacgcgaacgccttgcag
cgccctaagcgcttctttggggccgcacgtaacatcgaggagggtggaagcctgaccatt
atcgcgactgctttgatcgacacgggttcgcgtatggacgaagtcatctttgaagaattc
aaaggcacgggtaacagcgagatcgttctcgatcgcaaagtggccgataaacgcgtcttc
ccagcaatggatattctgaagtccggtactcgcaaagaggaacttctggtgaataaaatc
gatctccagaaaacctttgttctgcgtcgtattctgaatccaatgggcacaaccgatgcc
attgaattcctgatttccaagttgaaacagaccaaaacaaactccgatttctttgattcg
atgaatacctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

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