KEGG   Hafnia alvei: AT03_13095
Entry
AT03_13095        CDS       T03425                                 
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
hav  Hafnia alvei
Pathway
hav02020  Two-component system
hav02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AT03_13095 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AT03_13095 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hav03021]
    AT03_13095 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:hav02035]
    AT03_13095 (fliA)
Transcription machinery [BR:hav03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AT03_13095 (fliA)
Bacterial motility proteins [BR:hav02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AT03_13095 (fliA)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 UPF0147 UPF0122
Other DBs
NCBI-ProteinID: AIU73237
UniProt: A0A097R3C5
Position
complement(2826042..2826764)
AA seq 240 aa
MSELYTADGVIDKNSLWQRYAPLVRHEALRLQVRLPASVELDDLLQAGGIGLLHAVERYD
AMQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVSAAMQRAEQRLHRAPTETEI
AQELDMPLVEYQQILLDTNTSHLFSYDEWREEHGDSAEPVFQQHEDANPLKQLLEGDLRQ
RVITAIEALPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLASQS
NT seq 723 nt   +upstreamnt  +downstreamnt
gtgagtgaattgtataccgccgacggcgtgatcgacaaaaattccctgtggcagcgctac
gctccgctagtgcgccatgaagcgctgcgtttgcaggttcgcctgcccgcaagcgttgaa
ctggacgacctgcttcaagccggaggtattgggctgttgcacgcggtcgaacgctacgat
gccatgcaggggacggcctttaccacctatgcggttcagcgcattcgcggtgcgatgctc
gatgagcttcgcagtcgtgattgggttccgcgcagcgtgcgtcgaaatgcccgtgaagtt
tcagcggctatgcagcgtgccgagcagcgtctgcatcgtgcaccaacagaaaccgaaata
gcgcaagaattggatatgcctttggtggagtaccagcagattttgttggataccaacacc
agccatcttttttcttatgatgagtggcgagaagagcatggcgacagcgccgaacctgtt
ttccaacagcatgaggatgctaatcctctcaaacagctgttagaaggggatctgcgccag
cgcgtgattactgcgattgaagccttgccggaacgtgaaaaactggttcttacgctttac
taccaagaagagctgaacctaaaggaaatcggtgcggtgcttgaggtcggagagtctcgc
gtcagtcagctacacagccaggcgatcaaacgcttgcgcactaagctggctagccaaagc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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