KEGG   Helicoverpa armigera (cotton bollworm): 110372363
Entry
110372363         CDS       T05609                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110372363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haw03021]
    110372363
   03019 Messenger RNA biogenesis [BR:haw03019]
    110372363
Enzymes [BR:haw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     110372363
Transcription machinery [BR:haw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     110372363
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110372363
SSDB
Motif
Pfam: Ssu72 LMWPc
Other DBs
NCBI-GeneID: 110372363
NCBI-ProteinID: XP_021184670
EnsemblRapid: LOC110372363
Position
10:7386856..7387434
AA seq 192 aa
MCDIYIAVVCSSNMNRSMEAHAFLAKKGFKVKSYGTGEKVKLPGASADRPNCYEFGVPYD
DIYNDLMEKDKVYYTQNGILHMLDRNRRIKPCPEKFQISTERFDVIITCEERVYDQVIEW
FGSKRSVYNQPVHVVNMDIQDNHEEATIGAFLISDMVTKMAQSDDLDNDIDELLHEFEGK
CHRPILNCIMFY
NT seq 579 nt   +upstreamnt  +downstreamnt
atgtgcgatatttacatcgcggttgtatgttcctcgaacatgaaccgtagtatggaagct
catgcatttcttgcgaagaaaggctttaaagttaagtcttatggcacaggagaaaaggtt
aagttaccaggtgcatctgctgatcgaccgaattgttatgaatttggagtcccttatgac
gatatatataacgatttaatggaaaaggataaagtttactacacacaaaatggtattctg
cacatgttagataggaacagaagaattaaaccctgtccagagaagttccagatatcaact
gagcggtttgatgttataataacttgtgaggaaagagtatacgatcaagtcatagaatgg
tttggttcaaaaagatcagtttataatcaaccagtccatgttgtgaatatggatattcaa
gataaccacgaagaagctaccattggtgcatttttaataagtgacatggtcacaaagatg
gctcaaagtgacgatttagataatgatattgatgaacttttgcatgagtttgaaggaaaa
tgtcaccggccaattcttaattgtataatgttttactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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