KEGG   Helicoverpa armigera (cotton bollworm): 110374515
Entry
110374515         CDS       T05609                                 
Name
(RefSeq) period circadian protein isoform X1
  KO
K02633  period circadian protein 2
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw04711  Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:haw00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04711 Circadian rhythm - fly
    110374515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:haw03400]
    110374515
DNA repair and recombination proteins [BR:haw03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    110374515
SSDB
Motif
Pfam: PAS_11 PAS_3 PAS Period_C Per3-like_PAS-A
Other DBs
NCBI-GeneID: 110374515
NCBI-ProteinID: XP_021187931
EnsemblRapid: LOC110374515
Position
1:complement(join(7020485..7020610,7020816..7020953,7021125..7021226,7021476..7021568,7022221..7022424,7023947..7024090,7024709..7024872,7025335..7025442,7026379..7026516,7027184..7027364,7027798..7027984,7028264..7028422,7028834..7028929,7030387..7030505,7031887..7032036,7032949..7033068,7033163..7033274,7033504..7033732,7033943..7034146,7035967..7036042,7036189..7036320,7037285..7037359,7048465..7048545,7048942..7049036,7051415..7051572,7051850..7051933,7054958..7055046))
AA seq 1187 aa
MDNLDDSENNAKISDSAYSNSCSNSQSRRSHSSKSTHSGSNSSGSSGYGGKPSTSGSSNN
LGQPPKKDKDPKKKKLLPQIETLVPDVVVEEARAPEPTPTFDAPKEEQLDVIPSLPPAHA
QSEKGVEDMDICAPELGTLNDEVVTCNISQVNPAANFVTGRPLQATYCSVQSKRYQEIGR
FEMRCENSEQLRCKDGFSCVISMHDGVVMYATSSLTTTLGFPKDMWIGRSFIDFVHPRDR
NTFASQITNGLAVPKIDNGTQEKVQFPANSVSTMVCRIRRYRGLTSGFGVKERVVGFMPF
LLKLTFKNISDEEGKVIYLVIQATPFFSAFKTPNELVTKAVPFVIRHAANGHIEYVDSES
VPYLGYLPQDLADKDALMLYHPDDLIYLRQVYDTIVKEGGLARSKSYRMITQNGDYIRLE
TEWSSFINPWSKKLEFVIGKHHIVEGPSNPDVFQSPDPDRTQKIPEEEKNKAQMLRENII
RTMNEVLTKPAELAKQQMSKRCQDLASFMESLMEEAPKTDEELRLEINDPDHSYYERDSV
MLGGISPHHDYYDSKSSTETPLSYSLLNYNDTLQRYFDSHQPVSYEEYNPVTGENVLGLK
DTRPFTNFSHCLSPMAQHSRDSGEMTCSSDSNGMAMGSNSPMMPLGDYQPIRLTEALLNK
HNAEMEKELMKIHRETRSSSKGEREKKSNETRKKKKEHLARCNASYHPTSAGATNVEYQV
GNQQQQHGVKRASKLMETDVGAHKHHCPSPRQARRNKRTLMTSPPATQPTSAVTTTVGQL
VTASNQWQAPPANNMNTFILGVGIPQQMSIMSPMPHPMQAMHTMSAVPGMFPMYYAPAAN
PQQMAASSAHHHIPSSSHHQFPAPMMMYGQPMYGSPFMYSPMAQQMTYPMQQSNLMAQTM
QQNTNTMYPLGLTSSNYEEACKPSLTLRPNKSQGVLWRDKKRPDSQGTSSKTDNGSGDSN
SSNALNRSTDAVQNTPPSRESRLNKLNRLGNSDETRDKTDGESSYSSFYSSFFKTESGSA
EDSGDGKNAKDKRLRSPINVTSSYYVPHPAKKPAARRKMEPPWMEQVCVTSELVYKYQIL
TKSMEETLTADKEKIENLEQPSLVNEQLSQLYLDLQLEGVAARLTLEEGITSSSSSGEET
TTNVTKSSRRKREYSKLVMIYEEDAPLPPPAEDAAEGEAEASSSSTC
NT seq 3564 nt   +upstreamnt  +downstreamnt
atggacaacttagacgattcagagaacaatgcgaagatatcagattctgcctactcaaac
agctgcagcaacagccaatccaggagaagtcatagttcgaagtcaacccattctggaagc
aattcaagcggcagcagtggttatggcgggaaaccctccacttctggaagcagcaacaac
ttggggcaaccgcccaaaaaggacaaagatccaaagaaaaagaagctgctacctcagatt
gagactttggtacctgatgtagtggtggaagaggccagggcgcctgaaccgaccccaact
tttgatgcacccaaagaagagcagctagatgttatcccgtcgctgccccctgcgcatgcg
cagtcggagaagggagtggaggacatggacatatgtgccccggagctgggcacgctcaac
gatgaggtggttacgtgcaacatatctcaggttaaccctgcagccaacttcgtcacaggc
cgtcccctacaagctacgtattgctcggtgcaaagtaagcggtaccaggagattggccgc
ttcgagatgcgttgtgaaaactctgaacagttacgttgcaaggacggattttcatgcgtg
atatcgatgcatgatggcgtggtcatgtacgctacgtcgtctctcactactactcttggc
ttccctaaagacatgtggattggccgatcattcatcgacttcgtacacccaagggaccgc
aacacttttgcgtctcaaatcaccaatggtttggcagtcccgaaaattgataatggtacg
caagaaaaagtacaattcccagctaattcggtgtcgacaatggtctgtcgtataagacgg
tacagaggcctcacttctggttttggagtgaaagaaagagttgtgggatttatgccgttc
ttgcttaaattgaccttcaagaatattagcgatgaagaaggcaaagttatatacctggtc
attcaagctacgcccttcttttcggcattcaaaactccgaacgagttggtaacaaaggct
gtgccgtttgtaataagacacgcggccaatggtcacattgagtacgttgattcggaatcc
gtgccataccttggttatctgccgcaagacttagcggataaagatgcgttaatgttgtat
caccctgacgacctgatatatctacgtcaagtctatgacactattgtaaaagaaggaggt
ctggctagatcgaaatcttacaggatgataacacaaaatggagactacattcgtctggaa
acggagtggtcgtcatttataaacccttggtccaagaaactggaattcgttatcggcaag
catcacatagttgagggcccatctaacccagacgtgtttcaatctcccgacccggatagg
acacagaaaattccagaagaagagaaaaataaagcgcaaatgctcagagaaaacattatc
cgaacaatgaatgaggtcctaactaagccggcggaattggctaagcaacagatgagcaag
cgttgccaagacctggcttctttcatggagagtcttatggaagaagcgcccaagactgat
gaggaattacgcttagaaataaacgacccggaccatagttactatgaaagggactcggtg
atgctcggtggaatatccccacatcacgattattatgatagcaagtcgagcactgaaacc
ccgttgagctacagcctgcttaactacaatgacacgttacaacggtatttcgatagtcac
caacccgtctcctacgaggaatacaacccggtcaccggcgagaatgtccttggactaaaa
gacacgagaccgtttacaaatttcagtcattgcctgtccccgatggcgcaacattccagg
gactcgggtgagatgacgtgctcatctgattccaacggtatggcaatgggcagcaacagc
cccatgatgcctctaggagactaccagccaatccgcctcaccgaggccttgctaaacaag
cacaatgcagagatggaaaaggaattgatgaagatacatagggagactcgttctagcagc
aagggcgagagggaaaagaaatctaatgagacgaggaagaagaagaaagagcatttggcg
aggtgcaatgcgtcctaccatcctaccagtgctggggccaccaatgttgaataccaggtc
ggaaatcaacagcagcaacacggagtcaaacgggcttccaaactgatggagacggacgtc
ggtgcccacaagcatcactgcccgtcgccccgtcaggcgcgtcgtaacaaacgcaccctg
atgaccagcccgcccgccacgcagcccacctcagccgtcactaccaccgtcggtcagttg
gtcacagcatccaatcagtggcaagcgcctcccgctaataacatgaacacgttcatcctg
ggcgttgggatcccgcagcagatgtccatcatgagccccatgcctcatcccatgcaagcc
atgcacaccatgtcagctgtgccaggaatgttcccgatgtactacgccccggcggctaac
ccgcagcaaatggctgcgagttccgcacaccaccacattccttcaagcagccaccaccag
ttccctgcacccatgatgatgtacggtcagccaatgtacgggtctcctttcatgtattcc
ccaatggctcagcaaatgacctatcccatgcaacagtcgaacttgatggcccaaactatg
caacaaaacaccaatactatgtacccacttggacttactagcagcaattacgaagaggct
tgtaagcccagtttgacgttgagaccaaacaagtctcaaggagtattgtggcgcgacaag
aaacgaccagattcacaaggcacatcttcaaaaacagacaatggcagcggtgatagtaac
tcttcgaatgccttgaaccggagcacagacgctgtgcaaaacaccccgccttcaagggag
agtcgactcaacaagctgaaccgtctgggcaacagcgacgaaacccgtgacaaaactgac
ggagaatctagctattcgtcattctactcctccttttttaagactgagtccggcagtgcc
gaggatagtggtgacggcaagaatgccaaggataagagacttaggagccctataaacgtg
acatcttcctactatgtacctcatcctgctaagaaacccgccgcccggaggaagatggaa
ccaccatggatggaacaggtctgcgtaacttcagaactagtctacaagtaccagatcctt
accaaatccatggaggaaacattgaccgctgataaagagaaaattgaaaatttagaacag
ccgtctctagtcaacgagcagctgagccagttgtacctggacttacaactcgaaggtgtg
gctgcgaggctcaccctcgaggaaggtatcaccagctcaagcagctccggcgaggaaacc
accactaatgtcactaagagttcacgtaggaagcgggaatacagcaaactagttatgatt
tacgaagaggacgcgcccctccccccgcccgcggaggacgccgccgagggagaggccgaa
gcctcaagttcttctacttgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (13)   
   RefSeq(pep) (13)   
DNA sequence (17)   
   RefSeq(nuc) (13)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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