KEGG   Helicoverpa armigera (cotton bollworm): 110379837
Entry
110379837         CDS       T05609                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03020  RNA polymerase
haw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110379837
  09124 Replication and repair
   03420 Nucleotide excision repair
    110379837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haw03021]
    110379837
   03400 DNA repair and recombination proteins [BR:haw03400]
    110379837
Transcription machinery [BR:haw03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110379837
DNA repair and recombination proteins [BR:haw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110379837
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD TF_Zn_Ribbon Zn_ribbon_recom Zn_Tnp_IS1595 DZR CpXC Elf1
Other DBs
NCBI-GeneID: 110379837
NCBI-ProteinID: XP_021195322
EnsemblRapid: LOC110379837
Position
5:12569065..12569445
AA seq 126 aa
MTLNLGRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNK
IMHEVDELTHINPDVVSDPTLPRTKDHMCPNCNHREAVFFQGQTRRAEEEMRLYYVCTSC
KHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atgacattaaatctaggaagaaaggatggcggcccaggctacgtcggaatacaattctgt
caagagtgcaacaacatgttgtatccgcgcgaagacaaaaacaacaaagttctgctgtat
gcctgcaggaattgtgattacaagcaactggctgactcaaactgcgtgtatgtgaacaaa
attatgcacgaagtcgacgaattaactcatattaacccggatgttgttagtgatcctact
ctacctaggacgaaggatcacatgtgccctaattgcaaccacagggaggcggtgttcttc
cagggccagaccagacgcgctgaagaggaaatgagactgtactacgtgtgcaccagttgt
aagcacaggtggactgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system