KEGG   Helicoverpa armigera (cotton bollworm): 110382249
Entry
110382249         CDS       T05609                                 
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X8
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:haw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    110382249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:haw03036]
    110382249
Chromosome and associated proteins [BR:haw03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     110382249
    REST complex
     110382249
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110382249
SSDB
Motif
Pfam: PAH Sin3_corepress Sin3a_C Coilin_N FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 110382249
NCBI-ProteinID: XP_063898258
EnsemblRapid: LOC110382249
Position
27:complement(join(1020185..1021051,1021459..1021580,1022234..1022327,1022872..1022960,1024671..1024838,1026427..1026625,1027403..1027507,1029793..1029966,1030663..1030877,1031603..1031743,1032698..1032855,1033391..1033562,1034103..1034202,1035354..1035428,1035825..1035962,1036581..1036709,1037240..1037334,1038041..1038165,1038498..1038548,1039605..1039714,1040810..1040933,1042201..1042457,1044647..1044816,1045170..1045233,1052560..1052634))
AA seq 1338 aa
MMKRTGVPRLGPDEPSPMPSQSQAQIQQAGSSNMHTLAQSAQPQILDIRSPAGPTTLLSV
GGGSFARTAARPAAGPVINYLKTGAVQYAAKQPPPQQVPQRLKALPPQQANLGALPAALE
RQSPAPAPLATPPGVGVGPGAQQQAAGQFQRLKVEDALSYLDQVKYKFNTQPQVYNDFLD
IMKEFKSQTIDTPGVITRVSNLFKGHPELIVGFNTFLPPGYKIEVQSNGQVSVSMPSPTG
FGGGVVLGVQHPPPPPPQLVHLLPVAQEAEKEAVRRANYSNMEMSVNNAIVHNLSVNAAP
TNTLHQISQAHQQIEAAAIHHAAAPGSAATNPPHVAPAPPSQPVEFNHAIEYVNKIKSRF
SRQPDKYKRFLEILHAYQRGHREMKEPQAKQQTEQEVYSQVAKLFENQEDLLAEFGQFLP
DAKAVSKPPERERHYVRDNPTPQHHQPPRVESEPERFPPAASPPPHHHHAPQQLPKHPSS
TSSTVTQPHQHLKRSPSFTSSSQMAVGAPPAKKSRVSGLTGATVRDVSYAEASKLATVHD
FNFFDRARKALRSQHVYDNFLRCLLLFTNEIISSSELLCVTAPFLCRHPELQKWLQDFLG
PPSPPHTPTNTLHSGYNNSGLGVSTGGVFDRARHDKRYEPIGQLGAQLRHDRPQGDAAMD
IDLTTCKRLGTSYCALPREAAARRCSGRTALCRDVLNDTWVSFPTWSEDSTFVTSRKTMY
EEYIYRCEDERFELDVVIETNASTIRVLEGVQKKLSRMTAEDAAKYRLDECLGGHSPTIH
QRALRRIYGDKAVDIIAGLKKNPVVAVPVVLRRLKAKEDEWREAQKGFNKQWREQNEKYY
LKSLDHQGINFKQNDLKAMRSKSLFNEVEAAYAARRPGPHVVVDYKMQSRQEAIKILRDT
AELLIHHARRQTAIQKTEKRRIKQLLRQFLPDLFAHPRQPLSDDERDEDDKDEAGSPGSP
PADANDNTSNSVKQEKQESSESDNASDKSGKNNKNKENKPKNNNNTDSKESSNASANSVK
RTSSNEEMSMKTEIKAEPELDDDYRDHPPNEARFVCTSSWYLFLRVHGALCQRLGAARRA
AAALSAARARERPARPPVAHALRLRPSNLPPDAAEPSHYYDVLLELVRAVLDGNMDPPAY
EDAAREMLGIEAYPAYTLDKLVASAVRQLQHCASEPWSVRCAELAARGGMRGPPAYVRRA
ARLLRRDHTAFLVKLYGGDACRVTFELLPGEPREPEPRWRYPRTPAPRKPVFLLRNARAR
APGYTHNAHSQPAAVGPARVHRRKPEAALPRLLGFRPLQLYARGALAAARASHARLHARR
RDAFRAWLATQPARADTF
NT seq 4017 nt   +upstreamnt  +downstreamnt
atgatgaaacgcacaggtgtaccgcggctcgggcctgatgagccctcgcctatgccttcg
cagagtcaagctcagattcaacaagcaggttcaagcaacatgcacactttagcccagtcg
gctcaaccccaaatattggacatacgttccccagcggggcccacaaccctgctctcagta
ggaggcgggagcttcgcccgcacggccgcgcggccggcagcggggcccgtcatcaactac
ctgaagaccggcgccgtgcagtatgctgctaaacagccgccgccccagcaggtgccgcag
aggcttaaggcactaccaccacaacaggccaacttaggggccttacccgcggccctagag
cgccaatcccccgcccccgcacctctagcaacaccccccggcgtgggagtgggcccaggg
gcccagcagcaggccgccggtcagttccagcgtctgaaggtggaagatgctctgtcgtac
cttgatcaagtcaagtacaagtttaatacgcaaccccaagtctataatgactttctggat
atcatgaaggaattcaagagtcagactatcgacaccccgggagtcatcacccgggtatcg
aacctgtttaaagggcatccggagctgattgtgggattcaacacatttttgccgccggga
tataagattgaagtacagagtaatggacaggtatcagtgtcgatgccgtctccgaccggg
ttcggcggcggcgtggtgttaggggtgcaacacccgccgcctcccccgccgcagttggta
catcttttgccggttgcacaggaggctgagaaagaagcagttcgtagagctaactactct
aacatggaaatgtcagtaaacaacgcgatagtacacaatctatcagtgaacgcggcgcca
accaacacgctgcaccagatctctcaggcacatcagcagattgaggccgccgctatacat
catgctgctgctcctgggtcagcggcgacgaacccgccgcatgtggctccggcgccgccc
agccagccggttgaattcaatcacgctattgaatatgttaataagattaagtcccgcttt
tctcgtcaaccggataagtacaagaggttcttggagattttgcacgcgtaccagcgagga
catcgggagatgaaggagccgcaagctaagcagcaaactgaacaggaggtttattctcag
gtggcgaaattatttgagaatcaagaggatctcttagcagagttcggtcagttcctgccg
gacgccaaggcggtgagcaagccgccagaacgcgagagacattatgtacgcgacaaccca
acgccacagcaccatcagccacctcgagtggagagcgagccggaacgcttcccgcccgcc
gcctcgccgccgccacatcatcatcatgctcctcagcagctaccaaaacacccgagttcg
acatcaagtacagtgacgcagccgcatcagcatctcaagagatctcccagtttcacctcc
tccagtcagatggcagtgggagccccgccagcgaagaagtcccgcgtatcagggctgaca
ggcgccacggtccgcgacgtgtcgtacgcggaggcgtcgaagctggccacggtgcacgac
ttcaacttcttcgacagggctcgcaaggcactgcgctcgcagcacgtctatgataacttc
ttgagatgtctccttctattcacgaacgagataatatcgtcgtcggagctgctctgcgtg
acggcgccgttcctgtgccgacatccggagttacagaagtggctgcaggacttcctgggg
ccaccttctccgccacacactcctacgaatactttgcatagcggctacaacaactcaggt
ttgggtgtgtctacgggcggcgtgttcgaccgagctcggcatgacaagcgctacgagccg
atcggccagctcggggcacagctgcgccacgaccggccgcagggcgacgccgccatggat
atagatctaacaacctgcaagcgcctcggcacgtcatactgcgccctcccgcgtgaagcc
gcggctcgtcgctgctccgggcgcacggcgctgtgccgcgacgtgctgaacgacacgtgg
gtgtccttccccacgtggagcgaggactccaccttcgttacctcgcgcaagaccatgtat
gaggagtatatttatcgctgcgaggatgagcggtttgagctggacgtagttatagaaacg
aacgcatcaacaatcagagtcctagaaggagtccagaagaagctgtcccgcatgacggcg
gaagacgccgccaagtaccggctggacgagtgcctcggcggacactcgcccaccatacac
cagcgggcgctgcgccggatatacggtgataaggcggtggatattatagctggtctcaag
aagaaccctgtggtggcggtgcccgttgtactgcggagactgaaagccaaggaggacgag
tggcgggaggcgcagaaaggcttcaacaagcaatggcgcgaacaaaacgagaagtactac
ttgaagtctctcgaccaccaaggcatcaacttcaaacagaatgacttgaaggccatgcgc
tcgaagtcgctgttcaatgaagtcgaagccgcgtacgctgcccgaagaccaggaccgcat
gttgtggtcgattataagatgcagagtcggcaggaagcaataaaaatcctccgcgacaca
gcagagcttctaatccaccacgctcgacgtcagacagcgatccagaagactgagaagcgt
cgcatcaagcagttactgcgccagttcctgccagacctgttcgcgcatcctcgacagccg
ctgtctgatgacgagagggatgaagacgacaaggacgaagccggcagtcccggcagcccg
ccagccgacgccaatgataacaccagcaattctgttaaacaggagaagcaggagtcatca
gaatctgataacgcgtccgacaagagcgggaaaaataataagaataaggaaaataagcct
aagaacaataataatactgatagtaaagaaagttcgaatgcatcagcgaatagcgtgaag
cgaacgagcagtaacgaggagatgtccatgaagactgagattaaagcggagcccgagctc
gacgatgattatagagatcatccgcctaatgaagcccgcttcgtatgcacatcgtcctgg
tacctgtttctgcgcgtgcacggcgcgctctgccagcgcctcggcgccgcccgacgcgcc
gccgccgccctctccgcagcccgcgcccgggagagaccagcccggcctcctgtcgcccac
gccctgcgcctccgcccctcaaacctacccccagatgccgcagaacccagccactactac
gatgtactgctagaactcgtccgagcagtactagacggcaatatggaccccccagcgtac
gaagacgccgcgcgagagatgctcggcattgaggcttatccagcctacacgctcgacaaa
ctcgtagcaagcgccgtcaggcagttacagcactgtgcgtcagaaccctggtctgtgagg
tgcgcggagctagcagcgagaggcggcatgagaggcccaccagcctatgtcagacgagcg
gcgagattactgcgacgagaccacacagccttcctcgtcaagttatacggcggagacgcc
tgcagagtcacatttgagctcctgccaggagagccgagagaacctgagccccgttggcgc
tatccacggacaccggcgccgcggaaaccagtctttctattacgaaatgcccgagcgaga
gcacccgggtacacacacaacgcgcattctcaaccagccgccgtcggacccgctcgagta
caccgccggaagcctgaagctgccctaccccggctgctaggcttccggccgctgcagctg
tacgcccgcggcgccctggccgccgcccgggcatctcatgcccggctccacgcgcgccgc
cgcgacgccttccgcgcctggctggcgacgcaacccgcccgcgccgacacgttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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