KEGG   Halomonas axialensis: HAALTHF_03930n
Entry
HAALTHF_03930n    CDS       T06639                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
haxi  Halomonas axialensis
Brite
KEGG Orthology (KO) [BR:haxi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:haxi03016]
    HAALTHF_03930n (truB)
Enzymes [BR:haxi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     HAALTHF_03930n (truB)
Transfer RNA biogenesis [BR:haxi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HAALTHF_03930n (truB)
 Prokaryotic type
    HAALTHF_03930n (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: BBI70398
Position
complement(254385..255302)
AA seq 305 aa
MPRRRRGLPVNGVVLLDKPKGLSSNHALQRAPSVRRAKAGHTGTLDPMATGLLPICLGEA
TKFSAHLLEADKMYRTRVELGVITDTGDAEGTVLERREVPNLAVEDIESVLTRFRGEIDQ
VPPMYSALKHQGKKLYELAREGKQVERAARRVSVYDARLLSFEGRAFELEVSCSKGTYIR
TLAEDIGHALGCGAHISQLRRLKTGPFDGDAMWTLEALEALASQADREAELMPVDVLVDH
LPSLSVDDTSFGRLAHGQSAHLAIGELAPDALARLYYAETFIGLGVVKGPQEVAPKRLLS
TVARS
NT seq 918 nt   +upstreamnt  +downstreamnt
atgccccgtcgccgtcgcggattaccggtcaatggcgtggtgctgctggataagccgaaa
ggcctctccagcaatcacgcgctgcagcgtgcgccgtctgttcgacgcgcaaaagccggg
cataccggcacgctggacccgatggcgacaggcttgctgcctatctgcctgggggaggcc
accaagttttccgcgcatctgctggaagccgacaagatgtatcgcacccgggtcgaactg
ggggtgatcaccgataccggcgatgccgaaggcactgtgctggagcggcgcgaggtgcca
aaccttgcggtcgaggacatcgaatctgtcttgacgcgttttcgcggcgagatcgatcag
gtgccgcccatgtactcggcgctcaagcatcagggtaaaaagctctacgagttggcccgc
gaggggaaacaggttgaacgtgcagcgcggcgggtaagcgtgtatgatgcgcgcctgctt
tcgttcgagggcagggcgttcgagctggaagtcagctgcagcaaaggcacgtacatccgc
acgttggcggaagacattggccacgcgctgggctgtggtgcccatatcagtcagctacgt
cggctcaaaaccgggccgttcgatggtgatgcgatgtggacactcgaggcactggaagca
ctggctagccaagccgaccgcgaggcggaactgatgcccgtggatgtgctggtcgatcac
ctgccgtcgcttagcgtcgatgacacctcgtttggaaggcttgcccacgggcagtctgcc
catctagccattggtgaattagcaccagatgcgctagcacgactttattacgccgagacg
tttatcggccttggcgttgtaaaagggcctcaggaagtggcccctaagcggctgttaagt
acggtcgctcgttcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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