KEGG T05707: C3V42

Haemophilus sp. oral taxon 036: C3V42_02260

Entry

C3V42_02260       CDS       T05707

Name

(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC

K03212

23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]

Organism

hay Haemophilus sp. oral taxon 036

Brite

KEGG Orthology (KO) [BR:hay00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hay03009]
    C3V42_02260
Enzymes [BR:hay01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     C3V42_02260
Ribosome biogenesis [BR:hay03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    C3V42_02260

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_15 Methyltransf_12 Methyltransf_25 Methyltransf_32 N6_Mtase UPF0020

Other DBs

NCBI-ProteinID:

AVM59530

Position

complement(467951..469129)

AA seq 392 aa
MIDCRYYQQNECRSCQWLEIPYSQQLTEKQHHLKQQLISINCDGPQWLAPFQSNEQGFRN
KAKMVVSGSVERPILGILKNPNDPQSSIDLCDCPLYPTHFSLIFPVLKDFIGRAGLVPYN
IAKQKGELKYILLTESIAMGKLMLRFVLRTEHKLPLIRRELPKLLAKLPHLEVVSINLQP
QHAAILEGEQEIFLTEQQFLPENFNDIPLFIRPQGFFQTNPKVAAGLYATAQKWVSELPI
YKVWDLFCGVGGFGLHCAKALQEKWGKRIELTGIEISSSAIFAASHSAKILGLEHVDFQS
LDAASVMKNQNENKPDLVIVNPPRRGIGKELSEFLNEMQSDFILYSSCNSVTMGKDLQYL
TFYKPLKIQLFDMFPQTSHYEVLVLLQRKKKS

NT seq 1179 nt +upstreamnt +downstreamnt
atgattgattgtcgatactatcaacaaaatgaatgtcgttcttgtcaatggcttgaaata
ccttatagtcagcagctgactgaaaaacaacatcatttaaagcagcaactgatttctatt
aattgcgatggacctcaatggttggctccttttcaatctaatgaacaaggctttcgtaat
aaagctaaaatggttgttagtggcagtgttgaacgcccgatacttggcattttaaaaaat
cctaatgatccacaaagctcgattgatttgtgtgattgtcccctttatccaactcatttt
tcattgatttttcctgttcttaaggattttattggccgtgctggtttagtaccttataac
attgctaaacaaaaaggcgagcttaaatatattctgctcacagaaagtatcgcgatggga
aaattaatgttgcgctttgtgttgcgcacagaacataaattgccattaattcgtcgagaa
ttaccaaaattattggcaaaattaccgcacttagaagtggttagcattaatttacagcca
cagcacgcggccattttagaaggtgaacaagaaatttttctgacagaacaacaatttttg
cctgaaaatttcaatgatattccgctctttattcgcccacaaggtttctttcaaactaac
cctaaagtggcggcgggattatatgctacagcccagaaatgggtgagtgaattaccaatc
tataaagtctgggatttattttgtggcgtgggaggatttggcttacattgcgctaaagct
ttacaggaaaaatggggaaaacgtattgagttgactggaattgaaatttcctcatccgct
atttttgctgcgagtcattccgctaaaatattgggtttagaacatgtagatttccagtca
ctagacgccgcaagtgtaatgaaaaatcagaatgagaataagccagatcttgtgattgta
aatccaccacgtcgtggaattggaaaggaattaagtgaatttcttaacgaaatgcaatcg
gactttattttatattctagttgtaattctgtaacaatgggtaaggatttacagtatctc
actttttataaaccattgaaaattcaactctttgatatgtttccacaaacatctcattat
gaagtattagttttactacaaagaaaaaagaagagttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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